RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 PAFAH1B1P43034 410 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CPT1AP50416 773 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CASP5P51878 434 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 POLR2FP61218 127 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 MRPS9P82933 396 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 MYL7Q01449 175 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 KCNMA1Q12791 1236 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 BFSP1Q12934 665 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 MAPK7Q13164 816 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 ITGA7Q13683 1181 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 RAPGEF1Q13905 1077 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 DCAF17Q5H9S7 520 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 C9orf50Q5SZB4 431 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CC2D1AQ6P1N0 951 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 C16orf46Q6P387 395 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 PSRC1Q6PGN9 363 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 KCNV1Q6PIU1 500 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 SLCO4C1Q6ZQN7 724 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 ENOSF1Q7L5Y1 443 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 MAP4K3Q8IVH8 894 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 SYCP3Q8IZU3 236 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 EIF1ADQ8N9N8 165 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 GALNT6Q8NCL4 622 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 GLIS3Q8NEA6 775 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CYP2W1Q8TAV3 490 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 COL26A1Q96A83 441 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 BORCS6Q96GS4 357 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 NTPCRQ9BSD7 190 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 STK33Q9BYT3 514 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 MTIF3Q9H2K0 278 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 VIPAS39Q9H9C1 493 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 AVENQ9NQS1 362 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 FAM53CQ9NYF3 392 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 ZMYM2Q9UBW7 1377 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 APEX2Q9UBZ4 518 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 BAZ2BQ9UIF8 2168 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 SAMM50Q9Y512 469 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 DNMT3AQ9Y6K1 912 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 V9GYY5 206 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 IGSF9BQ9UPX0 1349 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 NPHP3-ACAD11A0A0J9YXS1 232 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 EPHB6O15197 1021 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ADCY6O43306 1168 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 OIP5O43482 229 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 EXOC3O60645 756 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ZC3H11AO75152 810 aaKnown RBP eCLIP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 TGFB3P10600 412 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 GARTP22102 1010 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ITGB8P26012 769 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PON1P27169 355 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 TNFRSF8P28908 595 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 HOXD13P35453 343 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 FMO5P49326 533 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 KLK7P49862 253 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 IDH3AP50213 366 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ARSDP51689 593 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 JAM2P57087 298 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PCBP4P57723 403 aaKnown RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PTPN11Q06124 597 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PDE4CQ08493 712 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 SFSWAPQ12872 951 aaKnown RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ITGB3BPQ13352 177 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 TCEAL1Q15170 157 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 NAB2Q15742 525 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PPP2R5EQ16537 467 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 CFAP221Q4G0U5 840 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 XKR3Q5GH77 459 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 CCDC181Q5TID7 509 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 ZNF468Q5VIY5 522 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 MIS18BP1Q6P0N0 1132 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 CXCL17Q6UXB2 119 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 Q7L0L9 218 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 EEPD1Q7L9B9 569 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 HDXQ7Z353 690 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 FBXO16Q8IX29 292 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 RPUSD2Q8IZ73 545 aaKnown RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 MMGT1Q8N4V1 131 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 XXYLT1Q8NBI6 393 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 CAGE1Q8TC20 777 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 PIGOQ8TEQ8 1089 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 SCFD2Q8WU76 684 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 EDARADDQ8WWZ3 215 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 DHX38Q92620 1227 aaKnown RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 GJA10Q969M2 543 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 IFT43Q96FT9 208 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 FAM167AQ96KS9 214 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 IFT74Q96LB3 600 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 GUCD1Q96NT3 240 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 JPH2Q9BR39 696 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 FGFBP2Q9BYJ0 223 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 JPH1Q9HDC5 661 aaPredicted RBP6.11□□□□□ -1.43
HDAC8-216ENST00000470998 MED4Q9NPJ6 270 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 COL20A1Q9P218 1284 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
HDAC8-216ENST00000470998 COL11A1P12107 1806 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms