RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-218ENST00000470942 NELFCDQ8IXH7 590 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 EFCAB13Q8IY85 973 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 GPD1LQ8N335 351 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 USP25Q9UHP3 1055 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 WDR27A2RRH5 827 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 PRR33A8MZF0 331 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 PRRG1O14668 218 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
HDAC6-218ENST00000470942 ABLIM3O94929 683 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 PAPLNO95428 1278 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 ASGR2P07307 311 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 ODC1P11926 461 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 CPB1P15086 417 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 HOXA9P31269 272 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 HOXD13P35453 343 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 AARSP49588 968 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC6-218ENST00000470942 NUCB2P80303 420 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 EHHADHQ08426 723 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 GRASPQ7Z6J2 395 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-218ENST00000470942 NT5DC4Q86YG4 428 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 FSIP1Q8NA03 581 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
HDAC6-218ENST00000470942 SENP8Q96LD8 212 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
HDAC6-218ENST00000470942 UBE4BO95155 1302 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 SPTLC1O15269 473 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 PAX3P23760 479 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 TAF6P49848 677 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 NDUFA8P51970 172 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 WNT7BP56706 349 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 TPGS2Q68CL5 300 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 RTL10Q7L3V2 364 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 GET4Q7L5D6 327 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-218ENST00000470942 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 EXOC1Q9NV70 894 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 HSPBP1Q9NZL4 362 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 SORCS3Q9UPU3 1222 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 DOCK8Q8NF50 2099 aa16.97■□□□□ 0.31
HDAC6-218ENST00000470942 TECTAO75443 2155 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 A0A1W2PQ27 194 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 A0A1W2PQ64 194 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 A0A1W2PQD8 194 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 ARHGEF37A1IGU5 675 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 ZNF233A6NK53 670 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 CLIC2O15247 247 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 KLRC4O43908 158 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
HDAC6-218ENST00000470942 OAZ2O95190 189 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 LRG1P02750 347 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 ATF2P15336 505 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 TYMPP19971 482 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 FSHRP23945 695 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 NTHL1P78549 312 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 ADCY1Q08828 1119 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 HS2ST1Q7LGA3 356 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 MYADMQ96S97 322 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 OXCT2Q9BYC2 517 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-218ENST00000470942 PDE11AQ9HCR9 933 aa16.96■□□□□ 0.31
HDAC6-218ENST00000470942 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.96■□□□□ 0.31
HDAC6-218ENST00000470942 TMEM221A6NGB7 291 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 M0R296 226 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 CYB561D2O14569 222 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 TGFB1I1O43294 461 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 SEC24AO95486 1093 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 ITGB3P05106 788 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 OR4Q2P0C623 313 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 TMEM191BP0C7N4 346 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 CYP2J2P51589 502 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 SURF1Q15526 300 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 SV2CQ496J9 727 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 KMT5BQ4FZB7 885 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 RNF19BQ6ZMZ0 732 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 METTL23Q86XA0 190 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 TCEAL8Q8IYN2 117 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 CSGALNACT2Q8N6G5 542 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 RDH13Q8NBN7 331 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 ZNF560Q96MR9 790 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 KIAA1586Q9HCI6 787 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 AGPAT3Q9NRZ7 376 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 AFF4Q9UHB7 1163 aaKnown RBP16.95■□□□□ 0.3
HDAC6-218ENST00000470942 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
HDAC6-218ENST00000470942 TSC2P49815 1807 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 KPNA7A9QM74 516 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms