RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 B4E1Z4 1266 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 CRTAMO95727 393 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 SYN1P17600 705 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 CHMLP26374 656 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 CNTN2Q02246 1040 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 IKQ13123 557 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 SMAD4Q13485 552 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 CCDC96Q2M329 555 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 TMEM63BQ5T3F8 832 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 GJC2Q5T442 439 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 CHST3Q7LGC8 479 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 STK32CQ86UX6 486 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 SOCS4Q8WXH5 440 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 UBA5Q9GZZ9 404 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 SMOC1Q9H4F8 434 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 ANAPC4Q9UJX5 808 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 MYH4Q9Y623 1939 aa7.83□□□□□ -1.16
PTP4A1-202ENST00000470661 ZNF536O15090 1300 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SZT2Q5T011 3432 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 A0A1B0GTL3 188 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ZNF213O14771 459 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 FFAR3O14843 346 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ORC4O43929 436 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ZBED4O75132 1171 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 RASGRP1O95267 797 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 LTFP02788 710 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SRGAP2CP0DJJ0 459 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 FCER1AP12319 257 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SLC1A4P43007 532 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 GRIN1Q05586 938 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SPIRE1Q08AE8 756 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SQSTM1Q13501 440 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 CR1LQ2VPA4 569 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 VWA3BQ502W6 1294 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 AKNAD1Q5T1N1 836 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 MFSD14CQ5VZR4 134 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 CYB5R4Q7L1T6 521 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ZC3H18Q86VM9 953 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 PRPF38AQ8NAV1 312 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 PCDH19Q8TAB3 1148 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SLC7A14Q8TBB6 771 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 FERMT2Q96AC1 680 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ZBTB8AQ96BR9 441 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 MAML3Q96JK9 1138 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 MROH8Q9H579 483 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 ASH2LQ9UBL3 628 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 SFMBT1Q9UHJ3 866 aa7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 CTDP1Q9Y5B0 961 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-202ENST00000470661 PFASO15067 1338 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 PARP14Q460N5 1801 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 ARVCFO00192 962 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 MAFKO60675 156 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 TRIM13O60858 407 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 SNAI1O95863 264 aaPredicted RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 PGK1P00558 417 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 HOXC6P09630 235 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 ALAS1P13196 640 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 BMP7P18075 431 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 LRRC26Q2I0M4 334 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 HABP4Q5JVS0 413 aaKnown RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 STOX1Q6ZVD7 989 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 MB21D1Q8N884 522 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 TP53I13Q8NBR0 393 aaPredicted RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 GMCL1P1Q8NEA9 526 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 SHCBP1Q8NEM2 672 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 UHMK1Q8TAS1 419 aaKnown RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 PHOSPHO1Q8TCT1 267 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 STAG1Q8WVM7 1258 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 TBC1D5Q92609 795 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 TOE1Q96GM8 510 aaKnown RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 SENP6Q9GZR1 1112 aaPredicted RBP7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 SLC38A10Q9HBR0 1119 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 ZNF287Q9HBT7 754 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 VAT1LQ9HCJ6 419 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 DTLQ9NZJ0 730 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 FEM1BQ9UK73 627 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 OGDHLQ9ULD0 1010 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 LAMA3Q16787 3333 aa7.81□□□□□ -1.16
PTP4A1-202ENST00000470661 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 LAMA2P24043 3122 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 RBBP6Q7Z6E9 1792 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 ADCY6O43306 1168 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 STRNO43815 780 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 PYGMP11217 842 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 TOP1P11387 765 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 CYBAP13498 195 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 DLX2Q07687 328 aaPredicted RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 TUSC3Q13454 348 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 KCTD2Q14681 263 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 BRAPQ7Z569 592 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 RAB11FIP4Q86YS3 637 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 ANKRD35Q8N283 1001 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 GSTCDQ8NEC7 633 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 CLEC4DQ8WXI8 215 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms