RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 DBF4BQ8NFT6 615 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 LINC01599Q8WXQ3 324 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 RSPH1Q8WYR4 309 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 GAD1Q99259 594 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 SYT11Q9BT88 431 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 WNT8AQ9H1J5 351 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 TUBGCP4Q9UGJ1 667 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 MICAL3Q7RTP6 2002 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 UMODL1Q5DID0 1318 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 KIAA0355O15063 1070 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 RPL9P32969 192 aaKnown RBP16.21■□□□□ 0.19
COL4A5-203ENST00000470339 CYP2C18P33260 490 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 MLH1P40692 756 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 USP8P40818 1118 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 ASPAP45381 313 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 GUCY2FP51841 1108 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 NAB2Q15742 525 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 GLRA4Q5JXX5 417 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 LPPQ93052 612 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 ZFP42Q96MM3 310 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 ARID3AQ99856 593 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 LUC7LQ9NQ29 371 aaKnown RBP16.21■□□□□ 0.19
COL4A5-203ENST00000470339 GDAP2Q9NXN4 497 aa16.21■□□□□ 0.19
COL4A5-203ENST00000470339 CYP26A1O43174 497 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 TIMP1P01033 207 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 FAM163BP0C2L3 166 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 PNMA6AP0CW24 399 aaPredicted RBP16.2■□□□□ 0.18
COL4A5-203ENST00000470339 KRT5P13647 590 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 ZNF132P52740 706 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 CCL23P55773 120 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 TNNC1P63316 161 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 GRIK3Q13003 919 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 GLB1LQ6UWU2 654 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 ZNF677Q86XU0 584 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 REXO1L1PQ8IX06 675 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 SLC30A5Q8TAD4 765 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 ELMO3Q96BJ8 720 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
COL4A5-203ENST00000470339 AGPAT1Q99943 283 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 MIOSQ9NXC5 875 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 KANSL3Q9P2N6 904 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
COL4A5-203ENST00000470339 PCDHB4Q9Y5E5 795 aa16.2■□□□□ 0.18
COL4A5-203ENST00000470339 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 CLSTN1O94985 981 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 CYP11B1P15538 503 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 TNFAIP3P21580 790 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 SOX4Q06945 474 aaPredicted RBP16.19■□□□□ 0.18
COL4A5-203ENST00000470339 SV2CQ496J9 727 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 CNKSR3Q6P9H4 555 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 EPS8L1Q8TE68 723 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 ABHD8Q96I13 439 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 SCLYQ96I15 445 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 PPP1R13BQ96KQ4 1090 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 UROC1Q96N76 676 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL4A5-203ENST00000470339 ADAMTS1Q9UHI8 967 aa16.19■□□□□ 0.18
COL4A5-203ENST00000470339 NOCTQ9UK39 431 aaKnown RBP16.19■□□□□ 0.18
COL4A5-203ENST00000470339 REXO2Q9Y3B8 237 aaKnown RBP16.19■□□□□ 0.18
COL4A5-203ENST00000470339 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 A0A087X0T9 212 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 ZNF263O14978 683 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 HOXA2O43364 376 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 TUBB4AP04350 444 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 FAM228BP0C875 321 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 TAF6P49848 677 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 PDE6CP51160 858 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 SCNN1GP51170 649 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 CDR2Q01850 454 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 INCA1Q0VD86 236 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 TMEM270Q6UE05 265 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 DPH6Q7L8W6 267 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 LIMS2Q7Z4I7 341 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 SLC47A2Q86VL8 602 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 RBBP8NLQ8NC74 664 aaPredicted RBP16.18■□□□□ 0.18
COL4A5-203ENST00000470339 ACRBPQ8NEB7 543 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
COL4A5-203ENST00000470339 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 POLIQ9UNA4 740 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 PCDHB7Q9Y5E2 793 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
COL4A5-203ENST00000470339 USP27XA6NNY8 438 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 KPNA7A9QM74 516 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 PFKMP08237 780 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 PAEPP09466 180 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 WEE2P0C1S8 567 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 GZMAP12544 262 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 MAGEA1P43355 309 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms