RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 BRCC3P46736 316 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 TAF6P49848 677 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 RABGGTBP53611 331 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 BCAR1P56945 870 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 BTG3Q14201 252 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 WDR72Q3MJ13 1102 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 TIGD5Q53EQ6 642 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 RRAGAQ7L523 313 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 TMC6Q7Z403 805 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 BAP1Q92560 729 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 FAXDC2Q96IV6 333 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 PDLIM2Q96JY6 352 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ARID3AQ99856 593 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 GPR88Q9GZN0 384 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 INSL6Q9Y581 213 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NT5C1B-RDH14C9J2C7 533 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 B3GAT3O94766 335 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 MYOGP15173 224 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
SREBF1-209ENST00000470247 PBX3P40426 434 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 PNPLA4P41247 253 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 OR1G1P47890 313 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
SREBF1-209ENST00000470247 CDH8P55286 799 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 JAM2P57087 298 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 GCNT1Q02742 428 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 CUL2Q13617 745 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 SOWAHAQ2M3V2 549 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 ZNF667Q5HYK9 610 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
SREBF1-209ENST00000470247 SENP8Q96LD8 212 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 ZNF560Q96MR9 790 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NUP58Q9BVL2 599 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 EDEM3Q9BZQ6 932 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
SREBF1-209ENST00000470247 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 PRG3Q9Y2Y8 225 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-209ENST00000470247 NME7Q9Y5B8 376 aa12.08□□□□□ -0.48
SREBF1-209ENST00000470247 A0A1W2PQJ5 194 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 I3L4J1 428 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 M0QZQ0 153 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 FOXN3O00409 490 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-209ENST00000470247 TLL1O43897 1013 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 WEE2P0C1S8 567 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 CASP14P31944 242 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 GOLGA8FQ08AF8 430 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 GOLGA8DPQ0D2H9 430 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 MYO1EQ12965 1108 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 DRAP1Q14919 205 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-209ENST00000470247 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 RNF168Q8IYW5 571 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-209ENST00000470247 SLC39A11Q8N1S5 342 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 PPM1KQ8N3J5 372 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 COLGALT1Q8NBJ5 622 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 WHAMMQ8TF30 809 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 HASPINQ8TF76 798 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 CPLX3Q8WVH0 158 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 SHC3Q92529 594 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-209ENST00000470247 MRPL45Q9BRJ2 306 aaKnown RBP12.07□□□□□ -0.48
SREBF1-209ENST00000470247 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 VN1R3Q9BXE9 311 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 STK33Q9BYT3 514 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 GPR62Q9BZJ7 368 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 IMPG2Q9BZV3 1241 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 SMYD3Q9H7B4 428 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 CYP3A43Q9HB55 503 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 NLRC4Q9NPP4 1024 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 CEP72Q9P209 647 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.07□□□□□ -0.481e-7■■□□□ 12
SREBF1-209ENST00000470247 SNX9Q9Y5X1 595 aa12.07□□□□□ -0.48
SREBF1-209ENST00000470247 LINC01553A4QN01 128 aa12.06□□□□□ -0.48
SREBF1-209ENST00000470247 CYB561D2O14569 222 aa12.06□□□□□ -0.48
SREBF1-209ENST00000470247 TACC1O75410 805 aa12.06□□□□□ -0.48
SREBF1-209ENST00000470247 FAM163BP0C2L3 166 aa12.06□□□□□ -0.48
SREBF1-209ENST00000470247 PNMA6AP0CW24 399 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-209ENST00000470247 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
SREBF1-209ENST00000470247 PAX3P23760 479 aa12.06□□□□□ -0.48
SREBF1-209ENST00000470247 RAP1GAPP47736 663 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms