RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 HAS1Q92839 578 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 HHIPQ96QV1 700 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 SLC32A1Q9H598 525 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 SLITRK3O94933 977 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 HMGB1P09429 215 aaKnown RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 GCFC2P16383 781 aaKnown RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 KRT32Q14532 448 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 PTPAQ15257 358 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 NPY5RQ15761 445 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 UAP1L1Q3KQV9 507 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 DCAF4L1Q3SXM0 396 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 CTXN3Q4LDR2 81 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 C19orf48Q6RUI8 117 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 POLR3BQ9NW08 1133 aaPredicted RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
LSM2-209ENST00000470083 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
LSM2-209ENST00000470083 H0Y626 953 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 PODXLO00592 558 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 TRDMT1O14717 391 aaKnown RBP13.18□□□□□ -0.3
LSM2-209ENST00000470083 RNF40O75150 1001 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 TRIM16O95361 564 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 APBB3O95704 486 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 GBP1P32455 592 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 RARRES1P49788 294 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 SOX4Q06945 474 aaPredicted RBP13.18□□□□□ -0.3
LSM2-209ENST00000470083 PLD1Q13393 1074 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 MAPK6Q16659 721 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 C11orf74Q86VG3 221 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 BEST2Q8NFU1 509 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 BRF1Q92994 677 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
LSM2-209ENST00000470083 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 ACKR2O00590 384 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 WEE1P30291 646 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 MCM2P49736 904 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 IRX4P78413 519 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
LSM2-209ENST00000470083 COL28A1Q2UY09 1125 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 SYT13Q7L8C5 426 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 CYP2U1Q7Z449 544 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 FAM177A1Q8N128 213 aaPredicted RBP13.17□□□□□ -0.3
LSM2-209ENST00000470083 HSD17B14Q9BPX1 270 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
LSM2-209ENST00000470083 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
LSM2-209ENST00000470083 THG1LQ9NWX6 298 aaKnown RBP13.17□□□□□ -0.3
LSM2-209ENST00000470083 EVLQ9UI08 416 aaPredicted RBP13.17□□□□□ -0.3
LSM2-209ENST00000470083 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
LSM2-209ENST00000470083 MARCH6O60337 910 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
LSM2-209ENST00000470083 EGFP01133 1207 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 CPB1P15086 417 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
LSM2-209ENST00000470083 EPHB3P54753 998 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 LMAN2Q12907 356 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 FBXO43Q4G163 708 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 XKR4Q5GH76 650 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 Q6ZUG5 572 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 GAREM2Q75VX8 874 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 SLFN12Q8IYM2 578 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 CHFRQ96EP1 664 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 BBC3Q96PG8 261 aaPredicted RBP13.16□□□□□ -0.3
LSM2-209ENST00000470083 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms