RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ARMCX6Q7L4S7 300 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-217ENST00000469223 EXOC8Q8IYI6 725 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 C3orf58Q8NDZ4 430 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 RPLP0P6Q8NHW5 317 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 MTRQ99707 1265 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 GPR88Q9GZN0 384 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 ZMYND12Q9H0C1 365 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-217ENST00000469223 EBF1Q9UH73 591 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 RBM8AQ9Y5S9 174 aaKnown RBP13.93□□□□□ -0.18
HDAC6-217ENST00000469223 HELZP42694 1942 aaKnown RBP13.92□□□□□ -0.18
HDAC6-217ENST00000469223 UPK3BL1B0FP48 263 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 UPK3BL2E5RIL1 263 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 QARSP47897 775 aaKnown RBP13.92□□□□□ -0.18
HDAC6-217ENST00000469223 CLCNKBP51801 687 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 TFDP1Q14186 410 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 DMC1Q14565 340 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 GLRA4Q5JXX5 417 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-217ENST00000469223 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 ZNF605Q86T29 641 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 TMC8Q8IU68 726 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 GOLGA2P5Q9HBQ8 144 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 FSCN3Q9NQT6 498 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 XPNPEP1Q9NQW7 623 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 DACH1Q9UI36 760 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 MBD1Q9UIS9 605 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-217ENST00000469223 YIPF1Q9Y548 306 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 PPME1Q9Y570 386 aa13.92□□□□□ -0.18
HDAC6-217ENST00000469223 A0A1B0GUA9 196 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 EML1O00423 815 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 TDP2O95551 362 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 MXD4Q14582 209 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 USP39Q53GS9 565 aaKnown RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 HDDC3Q8N4P3 179 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 GTPBP2Q9BX10 602 aaKnown RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 FBXL5Q9UKA1 691 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 SPTAN1Q13813 2472 aaKnown RBP13.91□□□□□ -0.18
HDAC6-217ENST00000469223 FLNCQ14315 2725 aa13.91□□□□□ -0.18
HDAC6-217ENST00000469223 UBR5O95071 2799 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-217ENST00000469223 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 ZBTB43O43298 467 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 TRAPPC3O43617 180 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 FTH1P19P0C7X4 201 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 MCM2P49736 904 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 TPGS2Q68CL5 300 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 PNPLA1Q8N8W4 532 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 TSTD1Q8NFU3 115 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 ETNPPLQ8TBG4 499 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-217ENST00000469223 ADAMTS14Q8WXS8 1223 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 ACDQ96AP0 544 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 LRRC3Q9BY71 257 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 TSC2P49815 1807 aa13.9□□□□□ -0.18
HDAC6-217ENST00000469223 J3QKU1 62 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 TK2O00142 265 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 TRDMT1O14717 391 aaKnown RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 ATXN7O15265 892 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 CFIP05156 583 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 CHMLP26374 656 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 UPP1Q16831 310 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 Q4G0T1 1027 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 ZNF843Q8N446 348 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 DAGLBQ8NCG7 672 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 HNRNPABQ99729 332 aaKnown RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 LXNQ9BS40 222 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 POLR3CQ9BUI4 534 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 BACH2Q9BYV9 841 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 HPS4Q9NQG7 708 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 TMEM74BQ9NUR3 256 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 OBP2AQ9NY56 170 aa13.89□□□□□ -0.19
HDAC6-217ENST00000469223 AFF4Q9UHB7 1163 aaKnown RBP13.89□□□□□ -0.19
HDAC6-217ENST00000469223 OTOL1A6NHN0 477 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-217ENST00000469223 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC6-217ENST00000469223 OPHN1O60890 802 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 CPB1P15086 417 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 GNA11P29992 359 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 CDC27P30260 824 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 USP11P51784 963 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 PTPAQ15257 358 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms