RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMEM63BQ5T3F8 832 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 RETREG2Q8NC44 543 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 ATP8B4Q8TF62 1192 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 TMEM143Q96AN5 459 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 NLRP4Q96MN2 994 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 EIF2AK1Q9BQI3 630 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 APOL6Q9BWW8 343 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 SNX25Q9H3E2 840 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 ACAD9Q9H845 621 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 SATB2Q9UPW6 733 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 CASP14P31944 242 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 LONP1P36776 959 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 PEX3P56589 373 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 NAA20P61599 178 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 CATSPER3Q86XQ3 398 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 MCF2L2Q86YR7 1114 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 LRRC71Q8N4P6 559 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 ESX1Q8N693 406 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 SYTL5Q8TDW5 730 aaPredicted RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 RAB3IPQ96QF0 476 aaPredicted RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 COMMD8Q9NX08 183 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 HACD3Q9P035 362 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 MYMKA6NI61 221 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 TTC34A8MYJ7 566 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 MAP3K7O43318 606 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 SERPINB7O75635 380 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 DLATP10515 647 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 CYP2C9P11712 490 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 KRT9P35527 623 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 MAGOHP61326 146 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 NR1D2Q14995 579 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 ANKDD1AQ495B1 522 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 PDCD4Q53EL6 469 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.5□□□□□ -0.73
NUP50-214ENST00000469163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
NUP50-214ENST00000469163 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 NAT14Q8WUY8 206 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 MAGOHBQ96A72 148 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 OLFM3Q96PB7 478 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 METTL14Q9HCE5 456 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 METTL5Q9NRN9 209 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 SNCAIPQ9Y6H5 919 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 K7ENM7 598 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 AP3B1O00203 1094 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 TEX33O43247 280 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
NUP50-214ENST00000469163 TMCC2O75069 709 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 OSBPP22059 807 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 CARSP49589 748 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZNF280AP59817 542 aaPredicted RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 KCNA1Q09470 495 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 PHLDB2Q86SQ0 1253 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 PATL1Q86TB9 770 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 SFR1Q86XK3 245 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 SUN5Q8TC36 379 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 MMP19Q99542 508 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 DNAI2Q9GZS0 605 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 PDGFCQ9NRA1 345 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 SLC12A6Q9UHW9 1150 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 IKBKGQ9Y6K9 419 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 TISP43B9A030 160 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 ICAM1P05362 532 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 ITGB5P18084 799 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 IFNAR2P48551 515 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 LLGL1Q15334 1064 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 KCTD19Q17RG1 926 aaPredicted RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZCCHC8Q6NZY4 707 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 BRSK2Q8IWQ3 736 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 GFM2Q969S9 779 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 FAM136AQ96C01 138 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZIC5Q96T25 663 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 CGREF1Q99674 301 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 NOC4LQ9BVI4 516 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 STK33Q9BYT3 514 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 RSPH9Q9H1X1 276 aaPredicted RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 AZI2Q9H6S1 392 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 CYP39A1Q9NYL5 469 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 CNOT8Q9UFF9 292 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 E7ENQ6 273 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 SLC16A4O15374 487 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 GGPS1O95749 300 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 GJB1P08034 283 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 CTNNA1P35221 906 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 CHKAP35790 457 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 PCYT1AP49585 367 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZNF131P52739 623 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 ZCWPW2Q504Y3 356 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 FAM178BQ8IXR5 827 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 C7orf57Q8NEG2 295 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms