RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GRM2Q14416 872 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 DEPDC1Q5TB30 811 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF658Q5TYW1 1059 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SYDE2Q5VT97 1194 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SNX30Q5VWJ9 437 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 IL23RQ5VWK5 629 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FYB2Q5VWT5 728 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CCSAPQ6IQ19 270 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 GALNT17Q6IS24 598 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RWDD4Q6NW29 188 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TMEM53Q6P2H8 277 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 AAGABQ6PD74 315 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PACS1Q6VY07 963 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LRRC74BQ6ZQY2 392 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RGS9BPQ6ZS82 235 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 BEND4Q6ZU67 534 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FRA10AC1Q70Z53 315 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 HS2ST1Q7LGA3 356 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NANOGNBQ7Z5D8 188 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TMC3Q7Z5M5 1100 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NET1Q7Z628 596 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 AACSQ86V21 672 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LONP2Q86WA8 852 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SFR1Q86XK3 245 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FOXP4Q8IVH2 680 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SCUBE1Q8IWY4 988 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FAM20CQ8IXL6 584 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LRRC34Q8IZ02 419 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 BBS5Q8N3I7 341 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RIBC1Q8N443 379 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FBXL6Q8N531 539 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CSGALNACT2Q8N6G5 542 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SHKBP1Q8TBC3 707 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC110Q8TBZ0 833 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FNDC8Q8TC99 324 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NEK9Q8TD19 979 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 UBLCP1Q8WVY7 318 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CASKIN2Q8WXE0 1202 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 USP6NLQ92738 828 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SNF8Q96H20 258 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 MFSD14AQ96MC6 490 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 BIRC8Q96P09 236 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SERPINB12Q96P63 405 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LRRC37BQ96QE4 947 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CCT7Q99832 543 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ZKSCAN3Q9BRR0 538 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ADAM19Q9H013 955 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 UBN1Q9NPG3 1134 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PIH1D3Q9NQM4 214 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NMRK1Q9NWW6 199 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 UBAP1Q9NZ09 502 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 HESX1Q9UBX0 185 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PADI4Q9UM07 663 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CHMP2BQ9UQN3 213 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 DMTF1Q9Y222 760 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FAM32AQ9Y421 112 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 OAS3Q9Y6K5 1087 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NUMBLQ9Y6R0 609 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 MROH7-TTC4A0A0A0MT08 1334 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PITPNM2Q9BZ72 1349 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PALLDQ8WX93 1383 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PIK3C2AO00443 1686 aa5.15□□□□□ -1.58
SF3B1-207ENST00000468925 FAM208AQ9UK61 1670 aaKnown RBP5.15□□□□□ -1.58
SF3B1-207ENST00000468925 MYH7BA7E2Y1 1941 aa5.15□□□□□ -1.58
SF3B1-207ENST00000468925 MYH7P12883 1935 aa5.15□□□□□ -1.58
SF3B1-207ENST00000468925 CPS1P31327 1500 aa5.15□□□□□ -1.58
SF3B1-207ENST00000468925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SH3PXD2BA1X283 911 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PGRMC1O00264 195 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PSMA7O14818 248 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 HGSO14964 777 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MAGEB2O15479 319 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 GSC2O15499 205 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 POLR2DO15514 142 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TIMM44O43615 452 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 AKR1B10O60218 316 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PHF2O75151 1096 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TCEA3O75764 348 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 GFPT2O94808 682 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ZBED1O96006 694 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 AFPP02771 609 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MZF1P28698 734 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CRABP2P29373 138 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SERPINB3P29508 390 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 EPS15P42566 896 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MAGEA1P43355 309 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 GUCY2FP51841 1108 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 POLGP54098 1239 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 NPEPPSP55786 919 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 AP2B1P63010 937 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 IL9RQ01113 521 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SLC7A5Q01650 507 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 GUCY1B3Q02153 619 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 DSG1Q02413 1049 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 KIF22Q14807 665 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF423Q2M1K9 1284 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms