RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 ZBTB6Q15916 424 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
SMC4-209ENST00000468653 FBXO47Q5MNV8 452 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 SMYD5Q6GMV2 418 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 HACE1Q8IYU2 909 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 RFFLQ8WZ73 363 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 TSPAN18Q96SJ8 248 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 BCO2Q9BYV7 579 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 AGO3Q9H9G7 860 aaKnown RBP20.28■□□□□ 0.84
SMC4-209ENST00000468653 UBQLN1Q9UMX0 589 aaKnown RBP20.28■□□□□ 0.84
SMC4-209ENST00000468653 PHF24Q9UPV7 400 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 PCNTO95613 3336 aa20.28■□□□□ 0.84
SMC4-209ENST00000468653 CENPFP49454 3210 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 XPOTO43592 962 aaKnown RBP20.27■□□□□ 0.84
SMC4-209ENST00000468653 MYCP01106 439 aaPredicted RBP20.27■□□□□ 0.84
SMC4-209ENST00000468653 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.848e-49■■■■■ 172.1
SMC4-209ENST00000468653 PAK2Q13177 524 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 CLEC16AQ2KHT3 1053 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 ZNF394Q53GI3 561 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 FAM26DQ5JW98 314 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 PAPD7Q5XG87 772 aaKnown RBP20.27■□□□□ 0.84
SMC4-209ENST00000468653 MNS1Q8NEH6 495 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.84
SMC4-209ENST00000468653 TRPV6Q9H1D0 765 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 ERVK-5Q9HDB9 667 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 TUBGCP4Q9UGJ1 667 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 PCDHGC5Q9Y5F6 944 aa20.27■□□□□ 0.84
SMC4-209ENST00000468653 NCANO14594 1321 aa20.27■□□□□ 0.83
SMC4-209ENST00000468653 RALGAPA2Q2PPJ7 1873 aa20.27■□□□□ 0.83
SMC4-209ENST00000468653 SMIM28A0A1B0GU29 152 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 TLR3O15455 904 aaKnown RBP20.26■□□□□ 0.83
SMC4-209ENST00000468653 CAND2O75155 1236 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 STAU1O95793 577 aaKnown RBP20.26■□□□□ 0.83
SMC4-209ENST00000468653 KCNE1P15382 129 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 CD52P31358 61 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 RAP1GAPP47736 663 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 TNNC1P63316 161 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 XKR4Q5GH76 650 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 ACAD10Q6JQN1 1059 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 SLC43A3Q8NBI5 491 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 SLC35G2Q8TBE7 412 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 CARD6Q9BX69 1037 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 CYP3A43Q9HB55 503 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 FAM105AQ9NUU6 356 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 RNF19AQ9NV58 838 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 PADI3Q9ULW8 664 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 SAR1BQ9Y6B6 198 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 ARVCFO00192 962 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 CD4P01730 458 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 GPC5P78333 572 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 AMPD2Q01433 879 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 ZNF618Q5T7W0 954 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 TRIM72Q6ZMU5 477 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 ARHGEF26Q96DR7 871 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 MMS19Q96T76 1030 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 SMYD3Q9H7B4 428 aa20.26■□□□□ 0.83
SMC4-209ENST00000468653 TRIP11Q15643 1979 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 GRID2IPA4D2P6 1211 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 ITGA4P13612 1032 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 CDH8P55286 799 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 LPIN1Q14693 890 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 RHOT2Q8IXI1 618 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 TPCN2Q8NHX9 752 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 OSBPL7Q9BZF2 842 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 HTTP42858 3142 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 MYH10P35580 1976 aa20.25■□□□□ 0.83
SMC4-209ENST00000468653 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 ZNF606Q8WXB4 792 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 SDCBP2Q9H190 292 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 OSGEPQ9NPF4 335 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 WBP1LQ9NX94 342 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 FRMPD3Q5JV73 1810 aa20.24■□□□□ 0.83
SMC4-209ENST00000468653 DNM1LO00429 736 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 CTIFO43310 598 aaKnown RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 FTCDO95954 541 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 CYP1A1P04798 512 aaPredicted RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 CKBP12277 381 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 UNGP13051 313 aaPredicted RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 HSPA6P17066 643 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 SSTR3P32745 418 aaPredicted RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 WHAMMP3Q1A5X7 153 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 C9orf57Q5W0N0 161 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 CYFIP2Q96F07 1278 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 DEFB118Q96PH6 123 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 PAK6Q9NQU5 681 aaPredicted RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 CTTNBP2NLQ9P2B4 639 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 SQORQ9Y6N5 450 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 PPEF2O14830 753 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 NCK2O43639 380 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 BRD2P25440 801 aaKnown RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 NSFP46459 744 aaKnown RBP20.23■□□□□ 0.83
SMC4-209ENST00000468653 MTFR1Q15390 333 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 PASD1Q8IV76 773 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 SYCE1Q8N0S2 351 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 CPA5Q8WXQ8 436 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 ZNF653Q96CK0 615 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms