RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 RNF186Q9NXI6 227 aa4.58□□□□□ -1.68
TMEM39A-204ENST00000468545 CLEC1BQ9P126 229 aa4.58□□□□□ -1.68
TMEM39A-204ENST00000468545 PCDHA7Q9UN72 937 aa4.58□□□□□ -1.68
TMEM39A-204ENST00000468545 PTCH2Q9Y6C5 1203 aa4.58□□□□□ -1.68
TMEM39A-204ENST00000468545 SMCHD1A6NHR9 2005 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 TRBV23-1A0A0A0MS06 115 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A1B0GVL5 298 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM86B1E9PN63 330 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 BIN1O00499 593 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 TNPO2O14787 897 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MEFVO15553 781 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CHMP2AO43633 222 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC37A4O43826 429 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 DLX3O60479 287 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 NEMFO60524 1076 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CUTAO60888 179 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 PPP6R2O75170 966 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 YEATS4O95619 227 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 BMP15O95972 392 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CYP3A4P08684 503 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM86B2P0C5J1 330 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 OR52Z1P0C646 297 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 HSPA6P17066 643 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 ADORA2AP29274 412 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CDC25AP30304 524 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MAPK4P31152 587 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MAP2K2P36507 400 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SREBF1P36956 1147 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 AFMP43652 599 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 PSMC4P43686 418 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 ALDH5A1P51649 535 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 ERVFC1P60507 584 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 C1QTNF8P60827 252 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 KCNAB2Q13303 367 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 LAPTM5Q13571 262 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 KIF22Q14807 665 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 STXBP2Q15833 593 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC14A2Q15849 920 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 IL17AQ16552 155 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 HSF5Q4G112 596 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 NCAPH2Q6IBW4 605 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 IQCEQ6IPM2 695 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 GALNT18Q6P9A2 607 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CLEC17AQ6ZS10 378 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 NLRX1Q86UT6 975 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 JAZF1Q86VZ6 243 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 JAMLQ86YT9 394 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SCUBE1Q8IWY4 988 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SAMD3Q8N6K7 520 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 C4orf32Q8N8J7 132 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 FSIP1Q8NA03 581 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 KREMEN2Q8NCW0 462 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SHCBP1Q8NEM2 672 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 RASSF8Q8NHQ8 419 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MYLIPQ8WY64 445 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MPHOSPH6Q99547 160 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MXRA8Q9BRK3 442 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 PDCD2LQ9BRP1 358 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 WDR11Q9BZH6 1224 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 CSRNP2Q9H175 543 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SP110Q9HB58 689 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 GOLGA2P5Q9HBQ8 144 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MAP3K20Q9NYL2 800 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 MORF4L1Q9UBU8 362 aa4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 ADD3Q9UEY8 706 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 SRPRBQ9Y5M8 271 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-204ENST00000468545 PFASO15067 1338 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CYP3A7-CYP3A51PA0A087WV96 503 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A087WWV3 80 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CCDC163A0A0D9SF12 145 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC15A5A6NIM6 579 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 NOTOA8MTQ0 251 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 B4DLN1 442 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 MSH4O15457 936 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 STRNO43815 780 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 GCFC2P16383 781 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ITGB5P18084 799 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PTMSP20962 102 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CYP3A7P24462 503 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 L1CAMP32004 1257 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CIITAP33076 1130 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 LTBRP36941 435 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 UBA7P41226 1012 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CORO7P57737 925 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 UBE2HP62256 183 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 MRPS9P82933 396 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SP4Q02446 784 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SP3Q02447 781 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 DHX8Q14562 1220 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SNX17Q15036 470 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CAMK4Q16566 473 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TMEM266Q2M3C6 531 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SKOR2Q2VWA4 1001 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 Q4G0T1 1027 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TIGD5Q53EQ6 642 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms