RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 LRRC55Q6ZSA7 311 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 Q6ZVU0 165 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 INTS8Q75QN2 995 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 WDR49Q8IV35 697 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ZC3H3Q8IXZ2 948 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM192Q8IY95 271 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 COLGALT2Q8IYK4 626 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 THNSL1Q8IYQ7 743 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GRAMD1CQ8IYS0 662 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 RNF168Q8IYW5 571 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 LINC00528Q8N1L1 170 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SLC39A11Q8N1S5 342 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GPD1LQ8N335 351 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM151AQ8N4L1 468 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 LRRC52Q8N7C0 313 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 XXYLT1Q8NBI6 393 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 COLGALT1Q8NBJ5 622 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GLIS3Q8NEA6 775 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SPATA18Q8TC71 538 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 HELQQ8TDG4 1101 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 POMGNT1Q8WZA1 660 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 STAMQ92783 540 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PPP2R3CQ969Q6 453 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 MRPL38Q96DV4 380 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 IGSF21Q96ID5 467 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FAXDC2Q96IV6 333 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CEP63Q96MT8 703 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FAM193BQ96PV7 902 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CDCA3Q99618 268 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CBWD1Q9BRT8 395 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 COLEC11Q9BWP8 271 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FGFBP2Q9BYJ0 223 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 HAPLN2Q9GZV7 340 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 NKX2-4Q9H2Z4 354 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TTYH1Q9H313 450 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SEMA6BQ9H3T3 888 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FAM124BQ9H5Z6 455 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CWH43Q9H720 699 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 RPF1Q9H9Y2 349 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SLC39A2Q9NP94 309 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 NGRNQ9NPE2 291 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 MTMR10Q9NXD2 777 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SNTG2Q9NY99 539 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SPG21Q9NZD8 308 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 HSPBP1Q9NZL4 362 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PARP2Q9UGN5 583 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PUF60Q9UHX1 559 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 DNMT3LQ9UJW3 386 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ITGA11Q9UKX5 1188 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 UBQLN1Q9UMX0 589 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PLAGL2Q9UPG8 496 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SSX2IPQ9Y2D8 614 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FRMD4BQ9Y2L6 1034 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 HES2Q9Y543 173 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 MRPL42Q9Y6G3 142 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SCN1AP35498 2009 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ANO9A1A5B4 782 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MEIS3P2A8K0S8 358 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ANKRD63C9JTQ0 380 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RNF225M0QZC1 329 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 NRP1O14786 923 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FSCN2O14926 492 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 SYN3O14994 580 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CETN3O15182 167 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MEFVO15553 781 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 STX10O60499 249 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 EXOC3O60645 756 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 LPXNO60711 386 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ZC3H11AO75152 810 aaKnown RBP eCLIP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FGF18O76093 207 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 B3GAT3O94766 335 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 PRPF6O94906 941 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ARHGEF15O94989 841 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FGFR1OPO95684 399 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 POMCP01189 267 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 NR3C1P04150 777 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 SOD2P04179 222 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ITGB1P05556 798 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CXCL8P10145 99 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MYOGP15173 224 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 BMP6P22004 513 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 NR2F2P24468 414 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CCNE1P24864 410 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 GTF2H1P32780 548 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CTNNB1P35222 781 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 PRCPP42785 496 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ACOT2P49753 483 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 SCNN1GP51170 649 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 AFF1P51825 1210 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 BCAR1P56945 870 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CYP24A1Q07973 514 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 PAK1Q13153 545 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM132DQ14C87 1099 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 UPP1Q16831 310 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 DUOXA2Q1HG44 320 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TTI2Q6NXR4 508 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FAM117BQ6P1L5 589 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms