RNA–Protein interactions for RNA: ENST00000468316.1

PRKRIP1-203, Transcript of PRKR interacting protein 1, humanhuman

TSL 1 (best)

Gene PRKRIP1, Length 2,045 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRIP1-203ENST00000468316 TRIM11Q96F44 468 aa16.91■□□□□ 0.3
PRKRIP1-203ENST00000468316 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
PRKRIP1-203ENST00000468316 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
PRKRIP1-203ENST00000468316 CNOT8Q9UFF9 292 aaKnown RBP16.91■□□□□ 0.3
PRKRIP1-203ENST00000468316 CHORDC1Q9UHD1 332 aaPredicted RBP16.91■□□□□ 0.3
PRKRIP1-203ENST00000468316 CITO14578 2027 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 CEP104O60308 925 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 CFHP08603 1231 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 WEE2P0C1S8 567 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 MYBL1P10243 752 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 AXLP30530 894 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 ATICP31939 592 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 NSFP46459 744 aaKnown RBP16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 VSNL1P62760 191 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 NOMO3P69849 1222 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 PPP1R2P3Q6NXS1 205 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 NME8Q8N427 588 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 BCO2Q9BYV7 579 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 AVENQ9NQS1 362 aaPredicted RBP16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
PRKRIP1-203ENST00000468316 PRKCZQ05513 592 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 SNX17Q15036 470 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 WDR72Q3MJ13 1102 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 RPS6KC1Q96S38 1066 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 PLEKHA5Q9HAU0 1116 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 MIF4GDA9UHW6 222 aaKnown RBP16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 SEPT4O43236 478 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 ERLIN1O75477 346 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 MCM3P25205 808 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 CRYBB1P53674 252 aaPredicted RBP16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 MESDQ14696 234 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 MON1BQ7L1V2 547 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 TMEM40Q8WWA1 233 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 VCPIP1Q96JH7 1222 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 LRRC1Q9BTT6 524 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 ITGA11Q9UKX5 1188 aa16.89■□□□□ 0.29
PRKRIP1-203ENST00000468316 RALGAPA2Q2PPJ7 1873 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 AOC2O75106 756 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 SEC31AO94979 1220 aaKnown RBP16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 NKX3-2P78367 333 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 PHF13Q86YI8 300 aaPredicted RBP16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 TMEM130Q8N3G9 435 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.292e-7■■■■□ 22.6
PRKRIP1-203ENST00000468316 EIF2AQ9BY44 585 aaKnown RBP16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 CARD9Q9H257 536 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 SPC25Q9HBM1 224 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 DPP3Q9NY33 737 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 SNTG2Q9NY99 539 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 DERAQ9Y315 318 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 CASP8AP2Q9UKL3 1982 aa16.88■□□□□ 0.29
PRKRIP1-203ENST00000468316 PGRMC1O00264 195 aaKnown RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 TOMM70O94826 608 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 PGK1P00558 417 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 GLE1Q53GS7 698 aaKnown RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 TTC7AQ9ULT0 858 aaPredicted RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 SCN10AQ9Y5Y9 1956 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 TMEM110-MUSTN1A8MSY1 372 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 STAU1O95793 577 aaKnown RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 RARBP10826 455 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 COMTP21964 271 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 RRM1P23921 792 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 SSTR3P32745 418 aaPredicted RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 RBP5P82980 135 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 CACNB2Q08289 660 aaPredicted RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 TRIM32Q13049 653 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 CXCL17Q6UXB2 119 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 RUBCNQ92622 972 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 HPDLQ96IR7 371 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 SNX27Q96L92 541 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 CYP3A43Q9HB55 503 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 NOC2LQ9Y3T9 749 aaKnown RBP16.87■□□□□ 0.29
PRKRIP1-203ENST00000468316 LSM8O95777 96 aaKnown RBP16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 P4HA1P13674 534 aa16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 GUCY2FP51841 1108 aa16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 CAP1Q01518 475 aa16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 SP3Q02447 781 aa16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 LONRF2Q1L5Z9 754 aa16.86■□□□□ 0.29
PRKRIP1-203ENST00000468316 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms