RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 CCDC149Q6ZUS6 474 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 C12orf56Q8IXR9 622 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 TMEM174Q8WUU8 243 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 PCIF1Q9H4Z3 704 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 SLC39A2Q9NP94 309 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 AGPAT3Q9NRZ7 376 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 DPP3Q9NY33 737 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 RBAKQ9NYW8 714 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-215ENST00000468018 HSPBP1Q9NZL4 362 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 TRIOO75962 3097 aa16.42■□□□□ 0.22
ATG4B-215ENST00000468018 GOLGA8IPA6NC78 632 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 GOLGA8JA6NMD2 632 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 H7C4K7 107 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 CYP11A1P05108 521 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 C8AP07357 584 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 PSMD2Q13200 908 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 KRBA2Q6ZNG9 492 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 SMG7Q92540 1137 aaKnown RBP16.41■□□□□ 0.22
ATG4B-215ENST00000468018 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-215ENST00000468018 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
ATG4B-215ENST00000468018 ZNF318Q5VUA4 2279 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 CLUHO75153 1309 aa16.41■□□□□ 0.22
ATG4B-215ENST00000468018 ARHGEF37A1IGU5 675 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 N4BP1O75113 896 aaKnown RBP16.4■□□□□ 0.22
ATG4B-215ENST00000468018 ZNF202O95125 648 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 ATF2P15336 505 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 YWHAHQ04917 246 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-215ENST00000468018 DPYDQ12882 1025 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
ATG4B-215ENST00000468018 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 TPGS2Q68CL5 300 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 CBWD2Q8IUF1 395 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 C1orf127Q8N9H9 656 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
ATG4B-215ENST00000468018 SENP8Q96LD8 212 aa16.4■□□□□ 0.22
ATG4B-215ENST00000468018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-215ENST00000468018 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 VNN2O95498 520 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-215ENST00000468018 TAF6P49848 677 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
ATG4B-215ENST00000468018 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 NELFCDQ8IXH7 590 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 ENGASEQ8NFI3 743 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 SLC7A14Q8TBB6 771 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 LRFN3Q9BTN0 628 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-215ENST00000468018 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 KIAA1586Q9HCI6 787 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 MAFFQ9ULX9 164 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 TIMM13Q9Y5L4 95 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-215ENST00000468018 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 DENND4CQ5VZ89 1909 aa16.39■□□□□ 0.21
ATG4B-215ENST00000468018 ZNF233A6NK53 670 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 ZXDAP98168 799 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 SNRNP35Q16560 246 aaKnown RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 PTPN21Q16825 1174 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 PPM1LQ5SGD2 360 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 CACTINQ8WUQ7 758 aaKnown RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 EDAQ92838 391 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 INTS13Q9NVM9 706 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 DMAC2Q9NW81 257 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 AFF4Q9UHB7 1163 aaKnown RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-215ENST00000468018 PTPRDP23468 1912 aa16.38■□□□□ 0.21
ATG4B-215ENST00000468018 OR6C75A6NL08 312 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 PRR33A8MZF0 331 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 CLIC2O15247 247 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 SEC24AO95486 1093 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 ODC1P11926 461 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
ATG4B-215ENST00000468018 PNPLA4P41247 253 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 TFAMQ00059 246 aaKnown RBP16.37■□□□□ 0.21
ATG4B-215ENST00000468018 GPR17Q13304 367 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 KCNB1Q14721 858 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 SURF1Q15526 300 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 TMEM31Q5JXX7 168 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 OVOS1Q6IE37 1185 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 SLC9A9Q8IVB4 645 aa16.37■□□□□ 0.21
ATG4B-215ENST00000468018 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms