RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 KIF4AO95239 1232 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 GJB5O95377 273 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 ATP2A2P16615 1042 aaKnown RBP12.72□□□□□ -0.37
RNF13-208ENST00000467996 CASP14P31944 242 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 ASPAP45381 313 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF13-208ENST00000467996 HTRA4P83105 476 aaPredicted RBP12.72□□□□□ -0.37
RNF13-208ENST00000467996 GCNT1Q02742 428 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 RAPGEF1Q13905 1077 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 SV2CQ496J9 727 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 C9orf50Q5SZB4 431 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 PPFIBP1Q86W92 1011 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 HERC6Q8IVU3 1022 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 PHOSPHO2Q8TCD6 241 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 BAP1Q92560 729 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 KAT5Q92993 513 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 KREMEN1Q96MU8 473 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 YME1L1Q96TA2 773 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 ARID3AQ99856 593 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 CWH43Q9H720 699 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
RNF13-208ENST00000467996 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
RNF13-208ENST00000467996 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 F8W810 466 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 H0YGN5 161 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 TMEM189-UBE2V1I3L0A0 370 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 MFAP3LO75121 409 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 TPM1P09493 284 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 TBXAS1P24557 533 aaPredicted RBP12.71□□□□□ -0.37
RNF13-208ENST00000467996 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
RNF13-208ENST00000467996 OR1G1P47890 313 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 SLC11A1P49279 550 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 MFAP3P55082 362 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 JAM2P57087 298 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 LILRA4P59901 499 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 TNNC1P63316 161 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 GOLGA8FQ08AF8 430 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 GOLGA8DPQ0D2H9 430 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 CUL2Q13617 745 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
RNF13-208ENST00000467996 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 HASPINQ8TF76 798 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 FAXDC2Q96IV6 333 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 FAM81BQ96LP2 452 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
RNF13-208ENST00000467996 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 TMEM175Q9BSA9 504 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 EDEM3Q9BZQ6 932 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 GPR88Q9GZN0 384 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
RNF13-208ENST00000467996 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.37
RNF13-208ENST00000467996 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 AKR1B15C9JRZ8 316 aaPredicted RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 F8VZ95 297 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 NRP1O14786 923 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 B3GAT3O94766 335 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 ITGB1P05556 798 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 P4HA1P13674 534 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 RAP1GAPP47736 663 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF13-208ENST00000467996 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 BCAR1P56945 870 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 ZBED6P86452 979 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 SHHQ15465 462 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 PDXDC1Q6P996 788 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 DCLRE1AQ6PJP8 1040 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 ENOSF1Q7L5Y1 443 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 SPAG5Q96R06 1193 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 GDF15Q99988 308 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 ZBED2Q9BTP6 218 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 GDAP2Q9NXN4 497 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 LUC7L2Q9Y383 392 aaKnown RBP12.7□□□□□ -0.38
RNF13-208ENST00000467996 SNX9Q9Y5X1 595 aa12.7□□□□□ -0.38
RNF13-208ENST00000467996 GALTP07902 379 aa12.69□□□□□ -0.38
RNF13-208ENST00000467996 PNMA6AP0CW24 399 aaPredicted RBP12.69□□□□□ -0.38
RNF13-208ENST00000467996 KRT9P35527 623 aa12.69□□□□□ -0.38
RNF13-208ENST00000467996 PBX3P40426 434 aa12.69□□□□□ -0.38
RNF13-208ENST00000467996 BRCC3P46736 316 aa12.69□□□□□ -0.38
RNF13-208ENST00000467996 ARID5BQ14865 1188 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms