RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 MAP3K14Q99558 947 aa12.96□□□□□ -0.33
VPS26A-204ENST00000467852 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
VPS26A-204ENST00000467852 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
VPS26A-204ENST00000467852 PARP2Q9UGN5 583 aa12.96□□□□□ -0.33
VPS26A-204ENST00000467852 IL17BQ9UHF5 180 aa12.96□□□□□ -0.33
VPS26A-204ENST00000467852 NUP210Q8TEM1 1887 aaPredicted RBP12.95□□□□□ -0.34
VPS26A-204ENST00000467852 C6P13671 934 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 IL12RB1P42701 662 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 PCBP1Q15365 356 aaKnown RBP eCLIP12.95□□□□□ -0.34
VPS26A-204ENST00000467852 UGCGQ16739 394 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 PEAR1Q5VY43 1037 aaPredicted RBP12.95□□□□□ -0.34
VPS26A-204ENST00000467852 ANO7Q6IWH7 933 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 HEATR3Q7Z4Q2 680 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 OR2I1PQ8NGU4 316 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 SHKBP1Q8TBC3 707 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 SPIRE2Q8WWL2 714 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
VPS26A-204ENST00000467852 LRRC3BQ96PB8 259 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 CEP89Q96ST8 783 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
VPS26A-204ENST00000467852 CAPN10Q9HC96 672 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 RIC8AQ9NPQ8 531 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 KCNK4Q9NYG8 393 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 PTPRDP23468 1912 aa12.95□□□□□ -0.34
VPS26A-204ENST00000467852 PCDH15Q96QU1 1955 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 IGLV3-22A0A075B6J6 115 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 A0A1W2PRU2 124 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 C2orf72A6NCS6 295 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 HLA-EP13747 358 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 ITPKAP23677 461 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 GALK1P51570 392 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 ARPP19P56211 112 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 TWF1Q12792 350 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 BAP1Q92560 729 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 CPB2Q96IY4 423 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
VPS26A-204ENST00000467852 CEP72Q9P209 647 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 SRPK3Q9UPE1 567 aa12.94□□□□□ -0.34
VPS26A-204ENST00000467852 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 SEC24AO95486 1093 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 THP07101 528 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 SFNP31947 248 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 MCM2P49736 904 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 CXADRP78310 365 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 RHDQ02161 417 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 RUNX3Q13761 415 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
VPS26A-204ENST00000467852 NBR1Q14596 966 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 SLC8B1Q6J4K2 584 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
VPS26A-204ENST00000467852 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 PRPF31Q8WWY3 499 aaKnown RBP12.93□□□□□ -0.34
VPS26A-204ENST00000467852 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 GKN1Q9NS71 199 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 AHCTF1Q8WYP5 2266 aa12.93□□□□□ -0.34
VPS26A-204ENST00000467852 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 TMEM150BA6NC51 233 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 TSPAN1O60635 241 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 CYP3A4P08684 503 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 GP1BBP13224 206 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 TKTP29401 623 aaKnown RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 P2RY2P41231 377 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 ADCY7P51828 1080 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 JAK3P52333 1124 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 NAPAP54920 295 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 DSG2Q14126 1118 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 C2orf27AQ580R0 203 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 TPGS2Q68CL5 300 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 CMTR1Q8N1G2 835 aaKnown RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 MDGA1Q8NFP4 955 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 SETD7Q8WTS6 366 aaKnown RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 RLN3Q8WXF3 142 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 P2RY13Q9BPV8 354 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 DSCC1Q9BVC3 393 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 FBRSL1Q9HCM7 1045 aaKnown RBP12.92□□□□□ -0.34
VPS26A-204ENST00000467852 ANKMY1Q9P2S6 941 aa12.92□□□□□ -0.34
VPS26A-204ENST00000467852 FAM149AA5PLN7 773 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 ASAP2O43150 1006 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 CHMP2AO43633 222 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 CBFA2T3O75081 653 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 GJB3O75712 270 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 DDAH1O94760 285 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms