RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	SCN1A	P35498	2009 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	SRGAP2	O75044	1071 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	STAU1	O95793	577 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	CHRNA1	P02708	482 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	TFRC	P02786	760 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	WEE2	P0C1S8	567 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	UNG	P13051	313 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	P4HA1	P13674	534 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	AKAP5	P24588	427 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	TNNC1	P63316	161 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	GPC5	P78333	572 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	CKAP4	Q07065	602 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	PTK7	Q13308	1070 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	WDR72	Q3MJ13	1102 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	GLRA4	Q5JXX5	417 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	LHX8	Q68G74	356 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	ACAD10	Q6JQN1	1059 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	RHOT2	Q8IXI1	618 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	SYCE1	Q8N0S2	351 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	LRRC57	Q8N9N7	239 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	BEST2	Q8NFU1	509 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	SLC35G2	Q8TBE7	412 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	HPDL	Q96IR7	371 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZMAT2	Q96NC0	199 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	TSEN34	Q9BSV6	310 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	SMYD3	Q9H7B4	428 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	OSGEP	Q9NPF4	335 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	TRMT13	Q9NUP7	481 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	TUBGCP4	Q9UGJ1	667 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	PARP2	Q9UGN5	583 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	PUF60	Q9UHX1	559 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	UBQLN1	Q9UMX0	589 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435	ST3GAL5	Q9UNP4	418 aa		13.14	□□□□□ -0.31
HDLBP-231	ENST00000467435		A0A1W2PQ45	241 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435		A0A1W2PQY0	241 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	EFCAB8	A8MWE9	144 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	ATMIN	O43313	823 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	XPOT	O43592	962 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CYP1A1	P04798	512 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	TCP1	P17987	556 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CENPC	Q03188	943 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	NFX1	Q12986	1120 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	NAA30	Q147X3	362 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	TCEAL1	Q15170	157 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF394	Q53GI3	561 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	MEI1	Q5TIA1	1274 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	NAA35	Q5VZE5	725 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	ALKAL1	Q6UXT8	129 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	PASD1	Q8IV76	773 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	SMG8	Q8ND04	991 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CAGE1	Q8TC20	777 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	GOLGA1	Q92805	767 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CAPZA3	Q96KX2	299 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CALR3	Q96L12	384 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	TSPAN18	Q96SJ8	248 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	OSBPL9	Q96SU4	736 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	TLR10	Q9BXR5	811 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	SDCBP2	Q9H190	292 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CYP3A43	Q9HB55	503 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	KLK14	Q9P0G3	267 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CTTNBP2NL	Q9P2B4	639 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	GTF3C4	Q9UKN8	822 aa		13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	TDRD15	B5MCY1	1934 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-231	ENST00000467435	CTAGE15	A4D2H0	777 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	GPR182	O15218	404 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF185	O15231	689 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	TLR3	O15455	904 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	BUB1B	O60566	1050 aa	Predicted RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	CTAGE8	P0CG41	777 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	KCNE1	P15382	129 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	PRLR	P16471	622 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	BRD2	P25440	801 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	NSF	P46459	744 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	HADHB	P55084	474 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	NOMO3	P69849	1222 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	MYO1E	Q12965	1108 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	PAK2	Q13177	524 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	ELF2	Q15723	593 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZBTB6	Q15916	424 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	TRIM71	Q2Q1W2	868 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	XKR4	Q5GH76	650 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	FBXO47	Q5MNV8	452 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	TEX35	Q5T0J7	233 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	PPP1R2P3	Q6NXS1	205 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	SLFN11	Q7Z7L1	901 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	DAAM2	Q86T65	1068 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	CTAGE6	Q86UF2	777 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	CTAGE4	Q8IX94	777 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	HACE1	Q8IYU2	909 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF606	Q8WXB4	792 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	UBXN4	Q92575	508 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	C18orf25	Q96B23	403 aa	Predicted RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	TRIM11	Q96F44	468 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	RNF39	Q9H2S5	420 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	GOLPH3	Q9H4A6	298 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	ERVK-5	Q9HDB9	667 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	STARD7	Q9NQZ5	370 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	CHST12	Q9NRB3	414 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	FAM105A	Q9NUU6	356 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms