RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PPP3CBP16298 524 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 CREMQ03060 361 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 RBL2Q08999 1139 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 SQSTM1Q13501 440 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 CD300EQ496F6 205 aaPredicted RBP5.36□□□□□ -1.55
XRN1-206ENST00000467077 RASSF3Q86WH2 238 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 KRT73Q86Y46 540 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 KLC4Q9NSK0 619 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 SH3BP4Q9P0V3 963 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 TOR1BO14657 336 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 GPR32O75388 356 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 FKBP9O95302 570 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 ZNF844Q08AG5 666 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 RABEP1Q15276 862 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 FSCN1Q16658 493 aaKnown RBP5.35□□□□□ -1.55
XRN1-206ENST00000467077 PROSER3Q2NL68 480 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 CEP78Q5JTW2 689 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 CEP85Q6P2H3 762 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 CNNM4Q6P4Q7 775 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 FKBP9P1Q75LS8 142 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 LRRTM3Q86VH5 581 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 ACAP3Q96P50 834 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 FEZ1Q99689 392 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 GREM2Q9H772 168 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 EMC7Q9NPA0 242 aa5.35□□□□□ -1.55
XRN1-206ENST00000467077 TCRBV7S2A1N4TA0A589 114 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 KCNU1A8MYU2 1149 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 HAUS5O94927 633 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 ADCYAP1R1P41586 468 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 ADRM1Q16186 407 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 PLAC9Q5JTB6 97 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 CNGA4Q8IV77 575 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 ADGRG5Q8IZF4 528 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 PPM1KQ8N3J5 372 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 NLGN4YQ8NFZ3 816 aaPredicted RBP5.34□□□□□ -1.55
XRN1-206ENST00000467077 PMFBP1Q8TBY8 1022 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 AUTS2Q8WXX7 1259 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 FATE1Q969F0 183 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
XRN1-206ENST00000467077 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 JTBO76095 146 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 NR2F6P10588 404 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 SCP2P22307 547 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 ENPP1P22413 925 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 PCSK1P29120 753 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 ANXA11P50995 505 aaKnown RBP5.33□□□□□ -1.56
XRN1-206ENST00000467077 ZNF134P52741 427 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 DYRK1AQ13627 763 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 KRTAP27-1Q3LI81 207 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 PRAMEF17Q5VTA0 474 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 NSMCE1Q8WV22 266 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 TMEM79Q9BSE2 394 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
XRN1-206ENST00000467077 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
XRN1-206ENST00000467077 SYNPOQ8N3V7 929 aa5.32□□□□□ -1.56
XRN1-206ENST00000467077 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
XRN1-206ENST00000467077 CYFIP2Q96F07 1278 aa5.32□□□□□ -1.56
XRN1-206ENST00000467077 ADI1Q9BV57 179 aa5.32□□□□□ -1.56
XRN1-206ENST00000467077 TLR10Q9BXR5 811 aa5.32□□□□□ -1.56
XRN1-206ENST00000467077 VWC2LB2RUY7 222 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 SOCS2O14508 198 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 ARHGAP25P42331 645 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 PDCD1Q15116 288 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 LRRC41Q15345 812 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 SF3A1Q15459 793 aaKnown RBP5.31□□□□□ -1.56
XRN1-206ENST00000467077 DLK2Q6UY11 383 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 SLC29A4Q7RTT9 530 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 AHI1Q8N157 1196 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 PRSS3P2Q8NHM4 247 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 CCHCR1Q8TD31 782 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 ACE2Q9BYF1 805 aaPredicted RBP5.31□□□□□ -1.56
XRN1-206ENST00000467077 TMEM260Q9NX78 707 aa5.31□□□□□ -1.56
XRN1-206ENST00000467077 RB1CC1Q8TDY2 1594 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 ADGRA2Q96PE1 1338 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 MTHFD2P13995 350 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 NDUFB7P17568 137 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 MRPS9P82933 396 aaKnown RBP5.3□□□□□ -1.56
XRN1-206ENST00000467077 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
XRN1-206ENST00000467077 PCBP1Q15365 356 aaKnown RBP eCLIP5.3□□□□□ -1.56
XRN1-206ENST00000467077 TRIP6Q15654 476 aaKnown RBP5.3□□□□□ -1.56
XRN1-206ENST00000467077 ATP13A4Q4VNC1 1196 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 MEPCEQ7L2J0 689 aaKnown RBP5.3□□□□□ -1.56
XRN1-206ENST00000467077 ZBTB8BQ8NAP8 495 aaPredicted RBP5.3□□□□□ -1.56
XRN1-206ENST00000467077 TSPEARQ8WU66 669 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 MARK4Q96L34 752 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 IFT122Q9HBG6 1241 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 DMRT3Q9NQL9 472 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 CTTNBP2NLQ9P2B4 639 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 SCOCQ9UIL1 159 aa5.3□□□□□ -1.56
XRN1-206ENST00000467077 TISP43B9A030 160 aa5.29□□□□□ -1.56
XRN1-206ENST00000467077 SFPQP23246 707 aaKnown RBP eCLIP5.29□□□□□ -1.56
XRN1-206ENST00000467077 MTM1Q13496 603 aa5.29□□□□□ -1.56
XRN1-206ENST00000467077 SEPT7Q16181 437 aaKnown RBP5.29□□□□□ -1.56
XRN1-206ENST00000467077 NFE2L2Q16236 605 aa5.29□□□□□ -1.56
XRN1-206ENST00000467077 SH3TC2Q8TF17 1288 aa5.29□□□□□ -1.56
XRN1-206ENST00000467077 NELL2Q99435 816 aa5.29□□□□□ -1.56
XRN1-206ENST00000467077 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms