RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 MCM2P49736 904 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 TWF1Q12792 350 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 RUNX3Q13761 415 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 BYSLQ13895 437 aaKnown RBP14.02□□□□□ -0.17
UBR4-210ENST00000466969 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.17
UBR4-210ENST00000466969 CYB5R4Q7L1T6 521 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 FBRSL1Q9HCM7 1045 aaKnown RBP14.02□□□□□ -0.17
UBR4-210ENST00000466969 GKN1Q9NS71 199 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 PCDH15Q96QU1 1955 aa14.02□□□□□ -0.17
UBR4-210ENST00000466969 AP5Z1O43299 807 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 MAFO75444 373 aaPredicted RBP14.01□□□□□ -0.17
UBR4-210ENST00000466969 PRKCBP05771 671 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 SREBF1P36956 1147 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 SETQ01105 290 aaPredicted RBP14.01□□□□□ -0.17
UBR4-210ENST00000466969 SERINC3Q13530 473 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 UGCGQ16739 394 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 C6orf118Q5T5N4 469 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 SLC8B1Q6J4K2 584 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 MED8Q96G25 268 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 SH2D3AQ9BRG2 576 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 NIFKQ9BYG3 293 aaKnown RBP14.01□□□□□ -0.17
UBR4-210ENST00000466969 AK5Q9Y6K8 562 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 AHCTF1Q8WYP5 2266 aa14.01□□□□□ -0.17
UBR4-210ENST00000466969 KNTC1P50748 2209 aa14□□□□□ -0.17
UBR4-210ENST00000466969 ATXN1LP0C7T5 689 aaKnown RBP14□□□□□ -0.17
UBR4-210ENST00000466969 MX1P20591 662 aa14□□□□□ -0.17
UBR4-210ENST00000466969 TKTP29401 623 aaKnown RBP14□□□□□ -0.17
UBR4-210ENST00000466969 TLE3Q04726 772 aa14□□□□□ -0.17
UBR4-210ENST00000466969 XKR3Q5GH77 459 aa14□□□□□ -0.17
UBR4-210ENST00000466969 STXBP5Q5T5C0 1151 aa14□□□□□ -0.17
UBR4-210ENST00000466969 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
UBR4-210ENST00000466969 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
UBR4-210ENST00000466969 WHAMMQ8TF30 809 aa14□□□□□ -0.17
UBR4-210ENST00000466969 CHFRQ96EP1 664 aa14□□□□□ -0.17
UBR4-210ENST00000466969 DDX27Q96GQ7 796 aaKnown RBP14□□□□□ -0.17
UBR4-210ENST00000466969 CPB2Q96IY4 423 aa14□□□□□ -0.17
UBR4-210ENST00000466969 CDC6Q99741 560 aa14□□□□□ -0.17
UBR4-210ENST00000466969 FAM117AQ9C073 453 aa14□□□□□ -0.17
UBR4-210ENST00000466969 PRDM16Q9HAZ2 1276 aa14□□□□□ -0.17
UBR4-210ENST00000466969 TOR4AQ9NXH8 423 aa14□□□□□ -0.17
UBR4-210ENST00000466969 IGLV3-22A0A075B6J6 115 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 TRAPPC3O43617 180 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 TSPAN1O60635 241 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 DKK1O94907 266 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 U2AF2P26368 475 aaKnown RBP eCLIP13.99□□□□□ -0.175e-14■■■■■ 27
UBR4-210ENST00000466969 TRDNQ13061 729 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBR4-210ENST00000466969 SMAD1Q15797 465 aaKnown RBP13.99□□□□□ -0.17
UBR4-210ENST00000466969 PLEKHG6Q3KR16 790 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 PKDCCQ504Y2 493 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 TPGS2Q68CL5 300 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 FRMD1Q8N878 549 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 SNIP1Q8TAD8 396 aaKnown RBP13.99□□□□□ -0.17
UBR4-210ENST00000466969 CEP89Q96ST8 783 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 EBF3Q9H4W6 596 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 SENP2Q9HC62 589 aa13.99□□□□□ -0.17
UBR4-210ENST00000466969 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 B3GAT3O94766 335 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 THP07101 528 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 GNAQP50148 359 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 AP3B2Q13367 1082 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 ARHGAP15Q53QZ3 475 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 TICAM2Q86XR7 235 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 PRPF31Q8WWY3 499 aaKnown RBP13.98□□□□□ -0.17
UBR4-210ENST00000466969 PSPC1Q8WXF1 523 aaKnown RBP13.98□□□□□ -0.17
UBR4-210ENST00000466969 TBC1D32Q96NH3 1257 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 DCTPP1Q9H773 170 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
UBR4-210ENST00000466969 BCCIPQ9P287 314 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBR4-210ENST00000466969 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 OTOL1A6NHN0 477 aaPredicted RBP13.97□□□□□ -0.17
UBR4-210ENST00000466969 CHMP2AO43633 222 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 RPL6Q02878 288 aaKnown RBP13.97□□□□□ -0.17
UBR4-210ENST00000466969 ZNF33AQ06730 810 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 CCDC173Q0VFZ6 552 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 KCNH2Q12809 1159 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
UBR4-210ENST00000466969 CRY1Q16526 586 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 CCDC157Q569K6 752 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 TEX2Q8IWB9 1127 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 DEFB119Q8N690 84 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 FGF11Q92914 225 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 CD101Q93033 1021 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 FAM83CQ9BQN1 747 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 ATXN3LQ9H3M9 355 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
UBR4-210ENST00000466969 NUP210Q8TEM1 1887 aaPredicted RBP13.97□□□□□ -0.17
UBR4-210ENST00000466969 ITPR3Q14573 2671 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 A0A1W2PQD8 194 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 NPTXRO95502 500 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 PRAMEF12O95522 483 aa13.96□□□□□ -0.17
UBR4-210ENST00000466969 SFNP31947 248 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms