RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 GPSM3Q9Y4H4 160 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 PCDHGA1Q9Y5H4 931 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 INO80B-WBP1J3KQ70 363 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 DDX39AO00148 427 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 PBX3P40426 434 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 NLRP5P59047 1200 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 RPL10AP62906 217 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 SSRP1Q08945 709 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 NBR1Q14596 966 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 NFE2Q16621 373 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CCNI2Q6ZMN8 369 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 ZSCAN18Q8TBC5 510 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 TM6SF1Q9BZW5 370 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 LSG1Q9H089 658 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CCDC113Q9H0I3 377 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 TELO2Q9Y4R8 837 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 VWA8A3KMH1 1905 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 ANK1P16157 1881 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 TNRC6BQ9UPQ9 1833 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 SSBP05455 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CSH1P0DML2 217 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CSH2P0DML3 217 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 PNPLA4P41247 253 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 PSEN1P49768 467 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 FGD1P98174 961 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 ILKQ13418 452 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 RUNX3Q13761 415 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 PSAPL1Q6NUJ1 521 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 TAS1R1Q7RTX1 841 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 OVCA2Q8WZ82 227 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 CD101Q93033 1021 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 LRRC3Q9BY71 257 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 MRPL4Q9BYD3 311 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 RAB34Q9BZG1 259 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 LNPKQ9C0E8 428 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 UBQLN1Q9UMX0 589 aaKnown RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 MTF2Q9Y483 593 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-202ENST00000466963 RALGAPA1Q6GYQ0 2036 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 NOTCH4Q99466 2003 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 GVINP1Q7Z2Y8 2422 aa6.24□□□□□ -1.41
CXXC4-202ENST00000466963 NCANO14594 1321 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 KIF4AO95239 1232 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 NPTXRO95502 500 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 GNSP15586 552 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CCNE1P24864 410 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 OXTRP30559 389 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 RHDQ02161 417 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 SYCP2LQ5T4T6 812 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 SH3PXD2AQ5TCZ1 1133 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 METTL23Q86XA0 190 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 THEM5Q8N1Q8 247 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 FSIP1Q8NA03 581 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 SPIRE2Q8WWL2 714 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 BAP1Q92560 729 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MCRS1Q96EZ8 462 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 LXNQ9BS40 222 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 TBC1D14Q9P2M4 693 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MMP17Q9ULZ9 603 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 NDRG2Q9UN36 371 aaKnown RBP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CDY1Q9Y6F8 540 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CHD7Q9P2D1 2997 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 COL5A1P20908 1838 aaPredicted RBP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 LAD1O00515 517 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 ODC1P11926 461 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CYP11B2P19099 503 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CAPSQ13938 189 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CTXN3Q4LDR2 81 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 WDR45BQ5MNZ6 344 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 ARMCX5Q6P1M9 558 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MICU3Q86XE3 530 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 TMC8Q8IU68 726 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 DEPTORQ8TB45 409 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 TBCKQ8TEA7 893 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 FUBP3Q96I24 572 aaKnown RBP eCLIP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 DRC1Q96MC2 740 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 HSD17B14Q9BPX1 270 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 FAM83CQ9BQN1 747 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 ESYT1Q9BSJ8 1104 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 PDZD7Q9H5P4 517 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 ADAMTS20P59510 1910 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CER1O95813 267 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 PRKCBP05771 671 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 NUDT1P36639 197 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 GFPT1Q06210 699 aaPredicted RBP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 USP4Q13107 963 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MAPRE1Q15691 268 aaKnown RBP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 UGCGQ16739 394 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 USP37Q86T82 979 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MON1AQ86VX9 555 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 PDCD7Q8N8D1 485 aaKnown RBP6.23□□□□□ -1.41
CXXC4-202ENST00000466963 TSTD1Q8NFU3 115 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 HVCN1Q96D96 273 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CORO1BQ9BR76 489 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 CYP4F11Q9HBI6 524 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 FBXL5Q9UKA1 691 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms