RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 VN1R3Q9BXE9 311 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
GPC1-207ENST00000466624 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
GPC1-207ENST00000466624 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 EPOPA6NHQ4 379 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 LRRC10BA6NIK2 292 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 SYN3O14994 580 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 SPTLC1O15269 473 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 HLA-DRAP01903 254 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 FGFR3P22607 806 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 IGFBP6P24592 240 aaPredicted RBP17.21■□□□□ 0.35
GPC1-207ENST00000466624 PIK3CAP42336 1068 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 BRCC3P46736 316 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 MYL7Q01449 175 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 CETN1Q12798 172 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 SGSM1Q2NKQ1 1148 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 TIGD5Q53EQ6 642 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 PDE12Q6L8Q7 609 aaKnown RBP17.21■□□□□ 0.35
GPC1-207ENST00000466624 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 POF1BQ8WVV4 589 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 FAXDC2Q96IV6 333 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 ZBP1Q9H171 429 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 XYLT2Q9H1B5 865 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 TLR9Q9NR96 1032 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 CHST7Q9NS84 486 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 LMCD1Q9NZU5 365 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
GPC1-207ENST00000466624 GTPBP10A4D1E9 387 aaKnown RBP17.2■□□□□ 0.34
GPC1-207ENST00000466624 FSCN2O14926 492 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 GRM6O15303 877 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 LPXNO60711 386 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
GPC1-207ENST00000466624 TPM2P07951 284 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 CTSAP10619 480 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 TYMPP19971 482 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
GPC1-207ENST00000466624 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
GPC1-207ENST00000466624 MYL6P60660 151 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
GPC1-207ENST00000466624 KRT31Q15323 416 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 SCARA3Q6AZY7 606 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 PDXDC1Q6P996 788 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 VPS52Q8N1B4 723 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 SPATA18Q8TC71 538 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 GDPD5Q8WTR4 605 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 SENP8Q96LD8 212 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 IMPG2Q9BZV3 1241 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 NDST4Q9H3R1 872 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 RAB20Q9NX57 234 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 SSX2IPQ9Y2D8 614 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 IRAK3Q9Y616 596 aa17.2■□□□□ 0.34
GPC1-207ENST00000466624 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 CYP11A1P05108 521 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 FAM163BP0C2L3 166 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 ODC1P11926 461 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 POU3F3P20264 500 aaPredicted RBP17.19■□□□□ 0.34
GPC1-207ENST00000466624 DNAJB1P25685 340 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 GLUD2P49448 558 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 DSG1Q02413 1049 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 CAMK1Q14012 370 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 GRIN2CQ14957 1233 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 PTPROQ16827 1216 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 FAM171A1Q5VUB5 890 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 LIMS2Q7Z4I7 341 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 TOP6BLQ8N6T0 577 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 APPL2Q8NEU8 664 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 NGRNQ9NPE2 291 aaKnown RBP17.19■□□□□ 0.34
GPC1-207ENST00000466624 DSEQ9UL01 958 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 TRANK1O15050 2925 aa17.19■□□□□ 0.34
GPC1-207ENST00000466624 URODP06132 367 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
GPC1-207ENST00000466624 ZNF667Q5HYK9 610 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 KIAA0319Q5VV43 1072 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
GPC1-207ENST00000466624 TMEM86AQ8N2M4 240 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 SEMA4DQ92854 862 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 MRPL38Q96DV4 380 aaKnown RBP17.18■□□□□ 0.34
GPC1-207ENST00000466624 PRDM12Q9H4Q4 367 aa17.18■□□□□ 0.34
GPC1-207ENST00000466624 I3L4J1 428 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 CYB561D2O14569 222 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 HUS1O60921 280 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 P4HA1P13674 534 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms