RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 SAMD15Q9P1V8 674 aa16.43■□□□□ 0.22
SNED1-208ENST00000466618 CPSF2Q9P2I0 782 aaKnown RBP16.43■□□□□ 0.22
SNED1-208ENST00000466618 NOC2LQ9Y3T9 749 aaKnown RBP16.43■□□□□ 0.22
SNED1-208ENST00000466618 CEP104O60308 925 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 PPFIA2O75334 1257 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
SNED1-208ENST00000466618 SHBGP04278 402 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 KRT16P08779 473 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
SNED1-208ENST00000466618 EMC2Q15006 297 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 SLC18A3Q16572 532 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 MTHFD1LQ6UB35 978 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 EXOC8Q8IYI6 725 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 SLC7A3Q8WY07 619 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 SELENOSQ9BQE4 189 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 REEP2Q9BRK0 252 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 FAM167BQ9BTA0 163 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 TIPINQ9BVW5 301 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 GOLPH3Q9H4A6 298 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 STARD7Q9NQZ5 370 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 AMACRQ9UHK6 382 aa16.42■□□□□ 0.22
SNED1-208ENST00000466618 A0A087X0T9 212 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 C17orf102A2RUQ5 167 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 MAGEB2O15479 319 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 FAM228BP0C875 321 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 ITGA4P13612 1032 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 POLGP54098 1239 aaPredicted RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 EIF3BP55884 814 aaKnown RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 IGBP1P78318 339 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 DYMQ7RTS9 669 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 OSBPL1AQ9BXW6 950 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 ADAM22Q9P0K1 906 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 TTI1O43156 1089 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 CDK7P50613 346 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 ZNF131P52739 623 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 SLC5A9Q2M3M2 681 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 CWF19L1Q69YN2 538 aaKnown RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 GDF6Q6KF10 455 aaPredicted RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
SNED1-208ENST00000466618 SEZ6LQ9BYH1 1024 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 CEP72Q9P209 647 aa16.41■□□□□ 0.22
SNED1-208ENST00000466618 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 PGRMC1O00264 195 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 EVI5O60447 810 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 UPP2O95045 317 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 SOX10P56693 466 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ZNF200P98182 395 aaPredicted RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 SLC30A9Q6PML9 568 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 HOOK3Q86VS8 718 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 KIF2BQ8N4N8 673 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 DIS3LQ8TF46 1054 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNED1-208ENST00000466618 CELF4Q9BZC1 486 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 GPRC5CQ9NQ84 441 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 GGT7Q9UJ14 662 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ATP8A1Q9Y2Q0 1164 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
SNED1-208ENST00000466618 PVALEFA0A1B0GWK0 134 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 CCDC188H7C350 402 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ARVCFO00192 962 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 TREHO43280 583 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 SNX3O60493 162 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 HIP1RO75146 1068 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 GNAT1P11488 350 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 NEFHP12036 1026 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ARL2P36404 184 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 LRRC57Q8N9N7 239 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ITFG2Q969R8 447 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 PGM2Q96G03 612 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 DPH5Q9H2P9 285 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 SLITRK6Q9H5Y7 841 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 ARHGEF3Q9NR81 526 aa16.4■□□□□ 0.22
SNED1-208ENST00000466618 EIF4E1BA6NMX2 242 aaKnown RBP16.39■□□□□ 0.21
SNED1-208ENST00000466618 BTNL10A8MVZ5 291 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 NUDT17P0C025 328 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 RTP1P59025 263 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 POU5F1Q01860 360 aaKnown RBP16.39■□□□□ 0.21
SNED1-208ENST00000466618 BNIP1Q12981 228 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 PTPROQ16827 1216 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 EFCAB12Q6NXP0 572 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 MAEAQ7L5Y9 396 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 UBE2Q1Q7Z7E8 422 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 MFN1Q8IWA4 741 aa16.39■□□□□ 0.21
SNED1-208ENST00000466618 LRRC71Q8N4P6 559 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms