RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 VNN2O95498 520 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 TDGF1P13385 188 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 MARCKSP29966 332 aaPredicted RBP20.52■□□□□ 0.88
SRSF4-202ENST00000466448 SMTNP53814 917 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 YWHAHQ04917 246 aaPredicted RBP20.52■□□□□ 0.88
SRSF4-202ENST00000466448 HYIQ5T013 277 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 BEST2Q8NFU1 509 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 FAM3CQ92520 227 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 PNMA5Q96PV4 448 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 KIF2CQ99661 725 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 FAM126AQ9BYI3 521 aaPredicted RBP20.52■□□□□ 0.88
SRSF4-202ENST00000466448 TRPV4Q9HBA0 871 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 YIPF1Q9Y548 306 aa20.52■□□□□ 0.88
SRSF4-202ENST00000466448 TIMM13Q9Y5L4 95 aaPredicted RBP20.52■□□□□ 0.88
SRSF4-202ENST00000466448 NCOR2Q9Y618 2525 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 COL4A2P08572 1712 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 OR4Q2P0C623 313 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 LRPAP1P30533 357 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 TEAD2Q15562 447 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
SRSF4-202ENST00000466448 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-202ENST00000466448 SHKBP1Q8TBC3 707 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 DEPDC1BQ8WUY9 529 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 SECISBP2LQ93073 1101 aaKnown RBP20.51■□□□□ 0.87
SRSF4-202ENST00000466448 PGLYRP2Q96PD5 576 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 PLIN2Q99541 437 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 PLEKHA5Q9HAU0 1116 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 KCNG1Q9UIX4 513 aa20.51■□□□□ 0.87
SRSF4-202ENST00000466448 TRIP11Q15643 1979 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 TTC26A0AVF1 554 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 ARNTLO00327 626 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
SRSF4-202ENST00000466448 CLTAP09496 248 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 TNFSF9P41273 254 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
SRSF4-202ENST00000466448 AARSP49588 968 aaKnown RBP eCLIP20.5■□□□□ 0.875e-10■■■■■ 34.9
SRSF4-202ENST00000466448 SLC12A3P55017 1021 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 ATP2C1P98194 919 aaPredicted RBP20.5■□□□□ 0.87
SRSF4-202ENST00000466448 CACNB1Q02641 598 aaPredicted RBP20.5■□□□□ 0.87
SRSF4-202ENST00000466448 ZBTB6Q15916 424 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 MAMSTRQ6ZN01 415 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 MFSD6LQ8IWD5 586 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 RSPRY1Q96DX4 576 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 LRRC3Q9BY71 257 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 CRISPLD1Q9H336 500 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 SLITRK6Q9H5Y7 841 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 LMAN1LQ9HAT1 526 aa20.5■□□□□ 0.87
SRSF4-202ENST00000466448 NPHP3-ACAD11A0A0J9YXS1 232 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 ZNF263O14978 683 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 TGM1P22735 817 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 TMC8Q8IU68 726 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 KCTD17Q8N5Z5 321 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 IER2Q9BTL4 223 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 DNAJC25Q9H1X3 360 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
SRSF4-202ENST00000466448 UBQLN1Q9UMX0 589 aaKnown RBP20.49■□□□□ 0.87
SRSF4-202ENST00000466448 A0A1W2PRU2 124 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 HEPACAM2A8MVW5 462 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 PLA2G4BP0C869 781 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 CYP3A5P20815 502 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 CCNE1P24864 410 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 GUCY2FP51841 1108 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 NCKAP1LP55160 1127 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 PPP2R3AQ06190 1150 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 DUSP4Q13115 394 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 RILPL1Q5EBL4 403 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 USP37Q86T82 979 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 BICD1Q96G01 975 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 OXCT2Q9BYC2 517 aaPredicted RBP20.48■□□□□ 0.87
SRSF4-202ENST00000466448 GPR88Q9GZN0 384 aa20.48■□□□□ 0.87
SRSF4-202ENST00000466448 VWA3AA6NCI4 1184 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 OR6C75A6NL08 312 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 LACTBL1A8MY62 500 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 FAM189A1O60320 539 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 CHRNB1P11230 501 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 CCR3P51677 355 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 NRLP54845 237 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 LMNB2Q03252 620 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 GPR17Q13304 367 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 PLD1Q13393 1074 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 PPP2R5DQ14738 602 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 ENOX2Q16206 610 aaKnown RBP20.47■□□□□ 0.87
SRSF4-202ENST00000466448 TMEM119Q4V9L6 283 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 ARSHQ5FYA8 562 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 STXBP5Q5T5C0 1151 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 MCTP1Q6DN14 999 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 DSTYKQ6XUX3 929 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 HAUS6Q7Z4H7 955 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 E2F7Q96AV8 911 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 PARD6AQ9NPB6 346 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 LARSQ9P2J5 1176 aaKnown RBP20.47■□□□□ 0.87
SRSF4-202ENST00000466448 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
SRSF4-202ENST00000466448 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.47■□□□□ 0.87
SRSF4-202ENST00000466448 H0YCG3 227 aa20.46■□□□□ 0.87
SRSF4-202ENST00000466448 PPEF2O14830 753 aa20.46■□□□□ 0.87
SRSF4-202ENST00000466448 SDHBP21912 280 aa20.46■□□□□ 0.87
SRSF4-202ENST00000466448 ATXN1P54253 815 aaKnown RBP20.46■□□□□ 0.87
SRSF4-202ENST00000466448 EPHB3P54753 998 aa20.46■□□□□ 0.87
SRSF4-202ENST00000466448 MLLT6P55198 1093 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms