RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TUFT1Q9NNX1 390 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 GTSE1Q9NYZ3 720 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 ZMIZ1Q9ULJ6 1067 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 A0A1W2PRU2 124 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 EXTL3O43909 919 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 MED24O75448 989 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 RPP40O75818 363 aaKnown RBP15.84■□□□□ 0.13
CXCR4-203ENST00000466288 CDKL5O76039 1030 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 GRM5P41594 1212 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PON2Q15165 354 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PSAPL1Q6NUJ1 521 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PADI6Q6TGC4 694 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 RNF19BQ6ZMZ0 732 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 GPIHBP1Q8IV16 184 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 TTC8Q8TAM2 541 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 ZFYVE19Q96K21 471 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 SUSD3Q96L08 255 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 SMOC1Q9H4F8 434 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 SLC38A7Q9NVC3 462 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 DMXL2Q8TDJ6 3036 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 RALGAPA1Q6GYQ0 2036 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 CCDC163A0A0D9SF12 145 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 NEMFO60524 1076 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 VNN2O95498 520 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 KCNE1P15382 129 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PXNP49023 591 aaPredicted RBP15.84■□□□□ 0.13
CXCR4-203ENST00000466288 EFNA5P52803 228 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 STXBP5Q5T5C0 1151 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 ZNF280DQ6N043 979 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PKN3Q6P5Z2 889 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 UNQ6494/PRO21346Q6UXR6 183 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 ARID3BQ8IVW6 561 aaPredicted RBP15.84■□□□□ 0.13
CXCR4-203ENST00000466288 KDF1Q8NAX2 398 aaPredicted RBP15.84■□□□□ 0.13
CXCR4-203ENST00000466288 BEST2Q8NFU1 509 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 MKNK1Q9BUB5 465 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 DNAJC25Q9H1X3 360 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 CDT1Q9H211 546 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 POLD4Q9HCU8 107 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PTPRHQ9HD43 1115 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 TOPORSQ9NS56 1045 aaPredicted RBP15.84■□□□□ 0.13
CXCR4-203ENST00000466288 WASF3Q9UPY6 502 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 TNFSF13BQ9Y275 285 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 YIPF1Q9Y548 306 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 NUB1Q9Y5A7 615 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 PCDHGA5Q9Y5G8 931 aa15.84■□□□□ 0.13
CXCR4-203ENST00000466288 RPL9P32969 192 aaKnown RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 KRT2P35908 639 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 YARSP54577 528 aaKnown RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 OSTNP61366 133 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 PPP2R5AQ15172 486 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 DDX12PQ92771 950 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 C18orf25Q96B23 403 aaPredicted RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 ZC3H10Q96K80 434 aaKnown RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 CCDC94Q9BW85 323 aaPredicted RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 TMEM121BQ9BXQ6 578 aaPredicted RBP15.83■□□□□ 0.12
CXCR4-203ENST00000466288 TMEM60Q9H2L4 133 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 ZFYVE26Q68DK2 2539 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 SDK1Q7Z5N4 2213 aa15.83■□□□□ 0.12
CXCR4-203ENST00000466288 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 MEFVO15553 781 aaPredicted RBP15.82■□□□□ 0.12
CXCR4-203ENST00000466288 CTDNEP1O95476 244 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 CPB1P15086 417 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 MPLP40238 635 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 RNF43Q68DV7 783 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 APBB1IPQ7Z5R6 666 aaPredicted RBP15.82■□□□□ 0.12
CXCR4-203ENST00000466288 APPL2Q8NEU8 664 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 FAM200AQ8TCP9 573 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 POLR3CQ9BUI4 534 aaPredicted RBP15.82■□□□□ 0.12
CXCR4-203ENST00000466288 VPS45Q9NRW7 570 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 CNTN3Q9P232 1028 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 FREM2Q5SZK8 3169 aa15.82■□□□□ 0.12
CXCR4-203ENST00000466288 LAMA5O15230 3695 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 ARHGEF35A5YM69 484 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 AKAP3O75969 853 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 MCM4P33991 863 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 TNK2Q07912 1038 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 ACAP1Q15027 740 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 TCEAL6Q6IPX3 200 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 GAREM2Q75VX8 874 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 TCEAL3Q969E4 200 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 ACO2Q99798 780 aaKnown RBP15.81■□□□□ 0.12
CXCR4-203ENST00000466288 TM6SF1Q9BZW5 370 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 OBP2AQ9NY56 170 aa15.81■□□□□ 0.12
CXCR4-203ENST00000466288 K7ERI5 159 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 GIPC1O14908 333 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 REC8O95072 547 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 CCDC192P0DO97 292 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
CXCR4-203ENST00000466288 RPA1P27694 616 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 DUSP4Q13115 394 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 HAUS6Q7Z4H7 955 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 ACAP3Q96P50 834 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms