RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ID4P47928 161 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 AARSP49588 968 aaKnown RBP eCLIP22.44■■□□□ 1.18
COL6A1-203ENST00000466285 KARSQ15046 597 aaKnown RBP22.44■■□□□ 1.18
COL6A1-203ENST00000466285 TEAD2Q15562 447 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 TPGS2Q68CL5 300 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 PDZD4Q76G19 769 aaPredicted RBP22.44■■□□□ 1.18
COL6A1-203ENST00000466285 TMC8Q8IU68 726 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 BEST2Q8NFU1 509 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 SHKBP1Q8TBC3 707 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 BICD1Q96G01 975 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 LRRC3Q9BY71 257 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 AFF4Q9UHB7 1163 aaKnown RBP22.44■■□□□ 1.18
COL6A1-203ENST00000466285 OBSL1O75147 1896 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 K7ENM7 598 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 NFICP08651 508 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 MCM6Q14566 821 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 GPIHBP1Q8IV16 184 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 BCO2Q9BYV7 579 aa22.43■■□□□ 1.18
COL6A1-203ENST00000466285 ZNF334Q9HCZ1 680 aaPredicted RBP22.43■■□□□ 1.18
COL6A1-203ENST00000466285 CLTAP09496 248 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 PLCG1P19174 1290 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 EPHA5P54756 1037 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 PFKPQ01813 784 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 CSTF1Q05048 431 aaKnown RBP22.42■■□□□ 1.18
COL6A1-203ENST00000466285 WDR44Q5JSH3 913 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 CLDN23Q96B33 292 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 CDK5RAP3Q96JB5 506 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 TBX20Q9UMR3 447 aa22.42■■□□□ 1.18
COL6A1-203ENST00000466285 NDRG2Q9UN36 371 aaKnown RBP22.42■■□□□ 1.18
COL6A1-203ENST00000466285 HNRNPDLO14979 420 aaKnown RBP22.41■■□□□ 1.18
COL6A1-203ENST00000466285 NMT1P30419 496 aaKnown RBP22.41■■□□□ 1.18
COL6A1-203ENST00000466285 LIG4P49917 911 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 ZNF131P52739 623 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 SMTNP53814 917 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 YWHAHQ04917 246 aaPredicted RBP22.41■■□□□ 1.18
COL6A1-203ENST00000466285 PPP2R3AQ06190 1150 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 USP49Q70CQ1 688 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 APPL2Q8NEU8 664 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 OSBPL6Q9BZF3 934 aa22.41■■□□□ 1.18
COL6A1-203ENST00000466285 DENND4CQ5VZ89 1909 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ANKRD63C9JTQ0 380 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 H3BQV1 296 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ARNTLO00327 626 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 LAMTOR5O43504 91 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 OAZ2O95190 189 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 PIGRP01833 764 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 MTAPQ13126 283 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ZC2HC1CQ53FD0 456 aaPredicted RBP22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ARL6IP4Q66PJ3 421 aaKnown RBP22.4■■□□□ 1.18
COL6A1-203ENST00000466285 JADE1Q6IE81 842 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 MAP4K3Q8IVH8 894 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 OR10T2Q8NGX3 314 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ZSCAN18Q8TBC5 510 aaPredicted RBP22.4■■□□□ 1.18
COL6A1-203ENST00000466285 KCNN1Q92952 543 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 FAM84AQ96KN4 292 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 MKNK1Q9BUB5 465 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 BRD9Q9H8M2 597 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ZFP14Q9HCL3 533 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 PRMT8Q9NR22 394 aaPredicted RBP22.4■■□□□ 1.18
COL6A1-203ENST00000466285 KCND2Q9NZV8 630 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 ODF2LQ9ULJ1 636 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 UBQLN1Q9UMX0 589 aaKnown RBP22.4■■□□□ 1.18
COL6A1-203ENST00000466285 SLC27A5Q9Y2P5 690 aa22.4■■□□□ 1.18
COL6A1-203ENST00000466285 A0A1W2PRU2 124 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 MTMR11A4FU01 709 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 TDGF1P13385 188 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 GDI1P31150 447 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 HOXC13P31276 330 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 WNT7BP56706 349 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 DUSP4Q13115 394 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 ZC3H14Q6PJT7 736 aaKnown RBP22.39■■□□□ 1.17
COL6A1-203ENST00000466285 MYCT1Q8N699 235 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 ATAD1Q8NBU5 361 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 RAD54LQ92698 747 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 NELL1Q92832 810 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 DNASE1L2Q92874 299 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 SMARCD2Q92925 531 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 FAM212AQ96EL1 285 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 LRRC3BQ96PB8 259 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 HINFPQ9BQA5 517 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 SEMA4AQ9H3S1 761 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 PLEKHA5Q9HAU0 1116 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 ASAH2Q9NR71 780 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 LARSQ9P2J5 1176 aaKnown RBP22.39■■□□□ 1.17
COL6A1-203ENST00000466285 CPSF3Q9UKF6 684 aaKnown RBP22.39■■□□□ 1.17
COL6A1-203ENST00000466285 FBXO4Q9UKT5 387 aa22.39■■□□□ 1.17
COL6A1-203ENST00000466285 A0A0B4J269 797 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 MED19A0JLT2 244 aaPredicted RBP22.38■■□□□ 1.17
COL6A1-203ENST00000466285 OGTO15294 1046 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 FAM13AO94988 1023 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 ADRB2P07550 413 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 SOX9P48436 509 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 CYP4A22Q5TCH4 519 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 SCARA3Q6AZY7 606 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 ZNF512Q96ME7 567 aaPredicted RBP22.38■■□□□ 1.17
COL6A1-203ENST00000466285 MSTO1Q9BUK6 570 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 TRMT61BQ9BVS5 477 aaKnown RBP22.38■■□□□ 1.17
COL6A1-203ENST00000466285 ZHX3Q9H4I2 956 aa22.38■■□□□ 1.17
COL6A1-203ENST00000466285 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
COL6A1-203ENST00000466285 ZNF197O14709 1029 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms