RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 SUN5Q8TC36 379 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 MRPS27Q92552 414 aaKnown RBP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 HAS1Q92839 578 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 GJA10Q969M2 543 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 EXOC4Q96A65 974 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 ZNF700Q9H0M5 742 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 ADAM7Q9H2U9 754 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 FOXP1Q9H334 677 aaPredicted RBP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 SMARCAD1Q9H4L7 1026 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 CWH43Q9H720 699 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 LUC7LQ9NQ29 371 aaKnown RBP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 TCF7L2Q9NQB0 619 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 TBC1D22BQ9NU19 505 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 ERAP1Q9NZ08 941 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 FBXO2Q9UK22 296 aaPredicted RBP7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 GINS2Q9Y248 185 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 PCDHB7Q9Y5E2 793 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 HCFC2Q9Y5Z7 792 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 WDR87Q6ZQQ6 2873 aa7.89□□□□□ -1.15
RPUSD3-212ENST00000466141 CEP250Q9BV73 2442 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 M0QZ92 97 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 EIF3FO00303 357 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 TSPAN6O43657 245 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 OPA1O60313 960 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 GAS7O60861 476 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CLASP2O75122 1294 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PRPF40AO75400 957 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 NR1I2O75469 434 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 INSRRP14616 1297 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 IDEP14735 1019 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 HOXB8P17481 243 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 ATP4AP20648 1035 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 U2AF2P26368 475 aaKnown RBP eCLIP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CTHP32929 405 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 SLC26A2P50443 739 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 SPIRE1Q08AE8 756 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 MRPL28Q13084 256 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 GPS2Q13227 327 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PPP2R5CQ13362 524 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 RCN1Q15293 331 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 SAFBQ15424 915 aaKnown RBP eCLIP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 UGCGQ16739 394 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 INO80DQ53TQ3 878 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 IER5Q5VY09 327 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 LMBRD2Q68DH5 695 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CES5AQ6NT32 575 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 LRRC55Q6ZSA7 311 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PLPPR4Q7Z2D5 763 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 SNX32Q86XE0 403 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 NOSTRINQ8IVI9 506 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CKAP2LQ8IYA6 745 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 GBP7Q8N8V2 638 aaPredicted RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 TDRD5Q8NAT2 981 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 RDM1Q8NG50 284 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 GLG1Q92896 1179 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 EPSTI1Q96J88 318 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PPP1R16BQ96T49 567 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 RUFY1Q96T51 708 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 ADAM2Q99965 735 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 HINFPQ9BQA5 517 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 TEKT3Q9BXF9 490 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PPCSQ9HAB8 311 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 CDHR5Q9HBB8 845 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 ERVK-5Q9HDB9 667 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 ZNF69Q9UC07 566 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 PARP2Q9UGN5 583 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 MYH11P35749 1972 aa7.88□□□□□ -1.15
RPUSD3-212ENST00000466141 COL1A2P08123 1366 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 LINC00854A0A1B0GVQ3 168 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 ZBTB42B2RXF5 422 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 PDLIM1O00151 329 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 BACH1O14867 736 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 CHMP2AO43633 222 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 ZNF862O60290 1169 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 NEMFO60524 1076 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 CCNT1O60563 726 aaKnown RBP7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 B3GALNT1O75752 331 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 RTN3O95197 1032 aaPredicted RBP7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 LAG3P18627 525 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 OAS2P29728 719 aaKnown RBP7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 SFNP31947 248 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 STAT5BP51692 787 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 JAK3P52333 1124 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 HDAC4P56524 1084 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 CTAG1AP78358 180 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 MPP3Q13368 585 aa7.87□□□□□ -1.15
RPUSD3-212ENST00000466141 ORC2Q13416 577 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms