RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ALOX15P16050 662 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 RNASE9P60153 205 aaKnown RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ATP8B2P98198 1209 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 DSC2Q02487 901 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 MTM1Q13496 603 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ATP2B3Q16720 1220 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 RSPH3Q86UC2 560 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 WDR75Q8IWA0 830 aaKnown RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 C9orf106Q8NAJ2 232 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 REPS2Q8NFH8 660 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 DIS3LQ8TF46 1054 aaKnown RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 KAT5Q92993 513 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 KMT5AQ9NQR1 393 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 AJAP1Q9UKB5 411 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 POLHQ9Y253 713 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 PCDHB1Q9Y5F3 818 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ZMYM3Q14202 1370 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ATRNL1Q5VV63 1379 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
LRCH3-211ENST00000466054 DIRC3C9JPN6 131 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 AMY1AP04745 511 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 ATF3P18847 181 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 DDCP20711 480 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 CTXN1P60606 82 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 TARDBPQ13148 414 aaKnown RBP eCLIP5.5□□□□□ -1.53
LRCH3-211ENST00000466054 MFSD14BQ5SR56 506 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 OTUD7BQ6GQQ9 843 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 TTC8Q8TAM2 541 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 RUNDC1Q96C34 613 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 CCDC136Q96JN2 1154 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 CLPTM1LQ96KA5 538 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 MRGPRX4Q96LA9 322 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 LRGUKQ96M69 825 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 TAAR9Q96RI9 348 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 SPON1Q9HCB6 807 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 ANLNQ9NQW6 1124 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 MAN1C1Q9NR34 630 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 C1orf112Q9NSG2 853 aa5.5□□□□□ -1.53
LRCH3-211ENST00000466054 H3BML4 177 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 KIF3BO15066 747 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 SNRPA1P09661 255 aaKnown RBP5.49□□□□□ -1.53
LRCH3-211ENST00000466054 ITGAMP11215 1152 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 FXR1P51114 621 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRCH3-211ENST00000466054 TP53BP2Q13625 1128 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 ZNF267Q14586 743 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-211ENST00000466054 C14orf80Q86SX3 495 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 GRAMD1CQ8IYS0 662 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 ZGPATQ8N5A5 531 aaKnown RBP5.49□□□□□ -1.53
LRCH3-211ENST00000466054 C3orf20Q8ND61 904 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 IFI44Q8TCB0 444 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 RGMAQ96B86 450 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 CEP95Q96GE4 821 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 TMX3Q96JJ7 454 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 KRTAP1-5Q9BYS1 174 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 LDAHQ9H6V9 325 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 PRDM11Q9NQV5 511 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
LRCH3-211ENST00000466054 TBKBP1A7MCY6 615 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 CXorf49A8MYA2 514 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-211ENST00000466054 LEFTY2O00292 366 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 CTNND1O60716 968 aaKnown RBP5.48□□□□□ -1.53
LRCH3-211ENST00000466054 RBMXL2O75526 392 aaKnown RBP5.48□□□□□ -1.53
LRCH3-211ENST00000466054 ONECUT2O95948 504 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 PCSK1P29120 753 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 CLRN1P58418 232 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 NHLH1Q02575 133 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 NHLH2Q02577 135 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 TLE1Q04724 770 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 SRSF4Q08170 494 aaKnown RBP5.48□□□□□ -1.53
LRCH3-211ENST00000466054 HLTFQ14527 1009 aaKnown RBP eCLIP5.48□□□□□ -1.53
LRCH3-211ENST00000466054 BMT2Q1RMZ1 405 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 AFMIDQ63HM1 303 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 GADL1Q6ZQY3 521 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 SEM1Q6ZVN7 128 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 GPRIN1Q7Z2K8 1008 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 DENND1CQ8IV53 801 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 ZFP28Q8NHY6 868 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 FAM167AQ96KS9 214 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 CHST2Q9Y4C5 530 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 ACTL7AQ9Y615 435 aa5.48□□□□□ -1.53
LRCH3-211ENST00000466054 MATN4O95460 622 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 FTLP02792 175 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-211ENST00000466054 FTH1P19P0C7X4 201 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 RAP2AP10114 183 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 ATP5JP18859 108 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 FPR1P21462 350 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 ALDH1A3P47895 512 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 HK3P52790 923 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 GBX1Q14549 363 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 ARHGAP29Q52LW3 1261 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 DACT2Q5SW24 774 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 DRICH1Q6PGQ1 229 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-211ENST00000466054 CAMKK1Q8N5S9 505 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 STON2Q8WXE9 905 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 ASB10Q8WXI3 467 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 ACO2Q99798 780 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms