RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 GMCL1Q96IK5 515 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 ACP6Q9NPH0 428 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 STX18Q9P2W9 335 aaKnown RBP20.89■□□□□ 0.93
SDF4-205ENST00000465727 BCS1LQ9Y276 419 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 COQ4Q9Y3A0 265 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 POC1B-GALNT4F8VUJ3 575 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 HAUS5O94927 633 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 HOXA13P31271 388 aaPredicted RBP20.88■□□□□ 0.93
SDF4-205ENST00000465727 GPC3P51654 580 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 CCDC142Q17RM4 750 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 PPP1R15BQ5SWA1 713 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 LVRNQ6Q4G3 990 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 GSTA5Q7RTV2 222 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 C4orf33Q8N1A6 199 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 GMCL1P1Q8NEA9 526 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 RPGRQ92834 1020 aaKnown RBP20.88■□□□□ 0.93
SDF4-205ENST00000465727 CBWD1Q9BRT8 395 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 NPHS2Q9NP85 383 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 PDP2Q9P2J9 529 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 ZNF212Q9UDV6 495 aa20.88■□□□□ 0.93
SDF4-205ENST00000465727 DNAJC6O75061 913 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 AP1B1Q10567 949 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 DYNC1I2Q13409 638 aaKnown RBP20.87■□□□□ 0.93
SDF4-205ENST00000465727 KPNB1Q14974 876 aaKnown RBP20.87■□□□□ 0.93
SDF4-205ENST00000465727 KRT39Q6A163 491 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 RHOT1Q8IXI2 618 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 KATNAL2Q8IYT4 538 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 MCOLN2Q8IZK6 566 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 HELQQ8TDG4 1101 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 PTCD3Q96EY7 689 aaKnown RBP20.87■□□□□ 0.93
SDF4-205ENST00000465727 FGD4Q96M96 766 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 NT5C1BQ96P26 610 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 OSBPL8Q9BZF1 889 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 A8MXQ7 604 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 GNPATO15228 680 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 GSC2O15499 205 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 ATP9AO75110 1047 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 PROSCO94903 275 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 FDX1P10109 184 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 UNGP13051 313 aaPredicted RBP20.87■□□□□ 0.93
SDF4-205ENST00000465727 SESN3P58005 492 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 RNF220Q5VTB9 566 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 RFWD3Q6PCD5 774 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 DSTYKQ6XUX3 929 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 PLEKHO2Q8TD55 490 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 UCMAQ8WVF2 138 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 STMN2Q93045 179 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 CCDC28BQ9BUN5 200 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 PIDD1Q9HB75 910 aa20.87■□□□□ 0.93
SDF4-205ENST00000465727 WRAP73Q9P2S5 460 aaPredicted RBP20.87■□□□□ 0.93
SDF4-205ENST00000465727 ATP2A1O14983 1001 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 GYG2O15488 501 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 MAP3K13O43283 966 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 TJP3O95049 919 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 PSMG1O95456 288 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 PLS3P13797 630 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 CETN2P41208 172 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 MORF4L2Q15014 288 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 DRICH1Q6PGQ1 229 aaPredicted RBP20.86■□□□□ 0.93
SDF4-205ENST00000465727 ARHGAP24Q8N264 748 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 EXD1Q8NHP7 514 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.86■□□□□ 0.93
SDF4-205ENST00000465727 GATA6Q92908 595 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 MCUR1Q96AQ8 359 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 NSL1Q96IY1 281 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 LXNQ9BS40 222 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 KCNG1Q9UIX4 513 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.86■□□□□ 0.93
SDF4-205ENST00000465727 NFASCO94856 1347 aa20.86■□□□□ 0.93
SDF4-205ENST00000465727 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 CAPN9O14815 690 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 TM9SF1O15321 606 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 KCNA3P22001 575 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 GTF2IP78347 998 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ACSBG2Q5FVE4 666 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ENOSF1Q7L5Y1 443 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ZNF677Q86XU0 584 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 OGFOD1Q8N543 542 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 NR1H4Q96RI1 486 aaPredicted RBP20.85■□□□□ 0.93
SDF4-205ENST00000465727 HEMGNQ9BXL5 484 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 TRIM55Q9BYV6 548 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 TMX4Q9H1E5 349 aaPredicted RBP20.85■□□□□ 0.93
SDF4-205ENST00000465727 VPS11Q9H270 941 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ST6GALNAC4Q9H4F1 302 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ALOX15BO15296 676 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 MAP3K7O43318 606 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 BMP3P12645 472 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 CACNA2D1P54289 1103 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 KCNQ4P56696 695 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 KRT72Q14CN4 511 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 PLEKHG4Q58EX7 1191 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 PADI6Q6TGC4 694 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ZC3H18Q86VM9 953 aaKnown RBP20.85■□□□□ 0.93
SDF4-205ENST00000465727 ARHGAP18Q8N392 663 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 NRG4Q8WWG1 115 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 SEMA4DQ92854 862 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 ALKBH8Q96BT7 664 aaKnown RBP20.85■□□□□ 0.93
SDF4-205ENST00000465727 VPS37BQ9H9H4 285 aa20.85■□□□□ 0.93
SDF4-205ENST00000465727 TMEM8AQ9HCN3 771 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms