RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ERLIN2O94905 339 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 CXCL8P10145 99 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 AP3M2P53677 418 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 POLR2FP61218 127 aaKnown RBP9.51□□□□□ -0.89
UBA3-208ENST00000465627 LPIN1Q14693 890 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 MTF1Q14872 753 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 SURF1Q15526 300 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 ZBTB6Q15916 424 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 GJB7Q6PEY0 223 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 RAD9BQ6WBX8 426 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 CATSPER4Q7RTX7 472 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 IRF2BP2Q7Z5L9 587 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 USP37Q86T82 979 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 ARHGEF19Q8IW93 802 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 THNSL1Q8IYQ7 743 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
UBA3-208ENST00000465627 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 HELQQ8TDG4 1101 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 KREMEN1Q96MU8 473 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 CHP1Q99653 195 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 BAG1Q99933 345 aaPredicted RBP9.51□□□□□ -0.89
UBA3-208ENST00000465627 TCHPQ9BT92 498 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 CXCL16Q9H2A7 254 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 ASB7Q9H672 318 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
UBA3-208ENST00000465627 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 SPTLC3Q9NUV7 552 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 RAB20Q9NX57 234 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 ARHGAP20Q9P2F6 1191 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 MROH7Q68CQ1 1323 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 DMDP11532 3685 aa9.51□□□□□ -0.89
UBA3-208ENST00000465627 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 KBTBD13C9JR72 458 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 F8VZ95 297 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBA3-208ENST00000465627 IL18RAPO95256 599 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 HLA-DRAP01903 254 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 CKBP12277 381 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 RFX1P22670 979 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 PRKCIP41743 596 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 PRSS12P56730 875 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 LAPTM4AQ15012 233 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ZNF618Q5T7W0 954 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 LMBRD2Q68DH5 695 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ANKRD33Q7Z3H0 272 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 UBR7Q8N806 425 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 SCLT1Q96NL6 688 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 STK33Q9BYT3 514 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 XYLT2Q9H1B5 865 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 NLRC4Q9NPP4 1024 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 SIX4Q9UIU6 781 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 NENFQ9UMX5 172 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ST3GAL5Q9UNP4 418 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 REXO2Q9Y3B8 237 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 MGEA5O60502 916 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 LCA5LO95447 670 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 NPTXRO95502 500 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 CST3P01034 146 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 PLEKP08567 350 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 NFICP08651 508 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 TPM1P09493 284 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 CTSHP09668 335 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 THPOP40225 353 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 MATR3P43243 847 aaKnown RBP eCLIP9.5□□□□□ -0.897e-7■■■■□ 19.6
UBA3-208ENST00000465627 CYP26C1Q6V0L0 522 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 RRAGAQ7L523 313 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 TRAPPC11Q7Z392 1133 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 MRPL10Q7Z7H8 261 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 TMTC1Q8IUR5 882 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 TMEM130Q8N3G9 435 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 SHC3Q92529 594 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 KAT5Q92993 513 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 TATDN2Q93075 761 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 ZMAT2Q96NC0 199 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 FNBP1Q96RU3 617 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 ADPGKQ9BRR6 497 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 PBX4Q9BYU1 374 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 NXF3Q9H4D5 531 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 RPF1Q9H9Y2 349 aaKnown RBP9.5□□□□□ -0.89
UBA3-208ENST00000465627 PLEKHA5Q9HAU0 1116 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 CHST12Q9NRB3 414 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 CNTN3Q9P232 1028 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 DNAJC12Q9UKB3 198 aa9.5□□□□□ -0.89
UBA3-208ENST00000465627 PADI3Q9ULW8 664 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms