RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 RAB20Q9NX57 234 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 HCSTQ9UBK5 93 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 RALGAPA2Q2PPJ7 1873 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 CASTOR2A6NHX0 329 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 PPEF2O14830 753 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 KRT19P08727 400 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 POLR2BP30876 1174 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 RBP5P82980 135 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 MTF1Q14872 753 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 EXOC3L4Q17RC7 722 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 C9orf57Q5W0N0 161 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 GBP6Q6ZN66 633 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 YME1L1Q96TA2 773 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 PAAF1Q9BRP4 392 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 ZBED2Q9BTP6 218 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 NRDE2Q9H7Z3 1164 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 AGAP1Q9UPQ3 857 aa18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-203ENST00000465229 PIRO00625 290 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 SLC9A1P19634 815 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 IGFBP6P24592 240 aaPredicted RBP18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 PON1P27169 355 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 CLCNKBP51801 687 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 MYL6P60660 151 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 TRPC3Q13507 836 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 RABGGTAQ92696 567 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 FAM193BQ96PV7 902 aaPredicted RBP18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 XYLT2Q9H1B5 865 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 ZNHIT6Q9NWK9 470 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 DNAJB4Q9UDY4 337 aa18.18■□□□□ 0.5
EXOSC3-203ENST00000465229 COL4A6Q14031 1691 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 BMP8BP34820 402 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 KLK7P49862 253 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 MLLT1Q03111 559 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 BTG3Q14201 252 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 UPP1Q16831 310 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 DPY19L2P1Q6NXN4 242 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 CMTR2Q8IYT2 770 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 ELMO3Q96BJ8 720 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 DDX27Q96GQ7 796 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 RAD9AQ99638 391 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 DESI2Q9BSY9 194 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 PI4K2AQ9BTU6 479 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 INTS2Q9H0H0 1204 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 CWH43Q9H720 699 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 EPN1Q9Y6I3 576 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-203ENST00000465229 PODXLO00592 558 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 SGSM1Q2NKQ1 1148 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 FAM109BQ6ICB4 259 aaPredicted RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 WDR59Q6PJI9 974 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 CCDC170Q8IYT3 715 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 PCMTD1Q96MG8 357 aaPredicted RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 UROC1Q96N76 676 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 PTPRSQ13332 1948 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 PDCD11Q14690 1871 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 FNDC1Q4ZHG4 1894 aaPredicted RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 GRXCR1A8MXD5 290 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 TLL1O43897 1013 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 ASS1P00966 412 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 APBA1Q02410 837 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 ZNF662Q6ZS27 426 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 LRRC52Q8N7C0 313 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 C3orf58Q8NDZ4 430 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 APOBEC3GQ9HC16 384 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
EXOSC3-203ENST00000465229 F8W810 466 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 SPTLC1O15269 473 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 NDUFA10O95299 355 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 ALDH2P05091 517 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 GALTP07902 379 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 ATICP31939 592 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 OR1G1P47890 313 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 SLC11A1P49279 550 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 RABGGTBP53611 331 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 SPOPLQ6IQ16 392 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 DCLRE1AQ6PJP8 1040 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 CD300LGQ6UXG3 332 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 TATDN2Q93075 761 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 CHP1Q99653 195 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 TMEM175Q9BSA9 504 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 VRTNQ9H8Y1 702 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 SIX2Q9NPC8 291 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-203ENST00000465229 TDRD15B5MCY1 1934 aaKnown RBP18.14■□□□□ 0.49
EXOSC3-203ENST00000465229 NRP1O14786 923 aa18.14■□□□□ 0.49
EXOSC3-203ENST00000465229 B3GAT3O94766 335 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms