RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 MKNK1Q9BUB5 465 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 TRMT61BQ9BVS5 477 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 MAFFQ9ULX9 164 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 NDRG2Q9UN36 371 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 MRPS17Q9Y2R5 130 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 YIPF1Q9Y548 306 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 PIAS3Q9Y6X2 628 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 WDFY3Q8IZQ1 3526 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 RALGAPA1Q6GYQ0 2036 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 GREB1Q4ZG55 1949 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 SFI1A8K8P3 1242 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 MAN2B1O00754 1011 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 OAZ2O95190 189 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 CXCL8P10145 99 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 GDI1P31150 447 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 MCM4P33991 863 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 PRPHP41219 470 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-207ENST00000465209 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
COL11A1-207ENST00000465209 FCHO2Q0JRZ9 810 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 TEAD2Q15562 447 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 MFSD6LQ8IWD5 586 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 GPR161Q8N6U8 529 aaKnown RBP11.94□□□□□ -0.5
COL11A1-207ENST00000465209 LEMD2Q8NC56 503 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 ZSCAN18Q8TBC5 510 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-207ENST00000465209 FAM3CQ92520 227 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 PNMA5Q96PV4 448 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 TIPINQ9BVW5 301 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 ASAH2Q9NR71 780 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.94□□□□□ -0.5
COL11A1-207ENST00000465209 ANKFY1Q9P2R3 1169 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 DNM3Q9UQ16 869 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 EML5Q05BV3 1969 aa11.94□□□□□ -0.5
COL11A1-207ENST00000465209 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
COL11A1-207ENST00000465209 SPAG17Q6Q759 2223 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 HEPACAM2A8MVW5 462 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 LAD1O00515 517 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 PAPSS2O95340 614 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-207ENST00000465209 ADRB2P07550 413 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 OR4Q2P0C623 313 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
COL11A1-207ENST00000465209 PLS3P13797 630 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 TNFSF9P41273 254 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 SATB1Q01826 763 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 LMNB2Q03252 620 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 STXBP5Q5T5C0 1151 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 CYP4A22Q5TCH4 519 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 ZPBP2Q6X784 338 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 APPL2Q8NEU8 664 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 LRRC15Q8TF66 581 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 LRRC3BQ96PB8 259 aa11.93□□□□□ -0.5
COL11A1-207ENST00000465209 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
COL11A1-207ENST00000465209 TCHHQ07283 1943 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 PRR5-ARHGAP8B1AHC4 643 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 K7ESF4 209 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 PPEF2O14830 753 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 MYL4P12829 197 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CPB1P15086 417 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CYP3A5P20815 502 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CCR3P51677 355 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 NCKAP1LP55160 1127 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 ARHGAP8P85298 464 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 YWHAHQ04917 246 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-207ENST00000465209 SPAG1Q07617 926 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 DMWDQ09019 674 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 KRT79Q5XKE5 535 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 IQCEQ6IPM2 695 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 TXNDC11Q6PKC3 985 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 GAREM2Q75VX8 874 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 ELMOD1Q8N336 334 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 TTC9BQ8N6N2 239 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-207ENST00000465209 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CNTNAP3BQ96NU0 1288 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 TCHPQ9BT92 498 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CNTNAP3Q9BZ76 1288 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 RAB34Q9BZG1 259 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 LMAN1LQ9HAT1 526 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 C2orf42Q9NWW7 574 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 TIMM13Q9Y5L4 95 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-207ENST00000465209 KIAA1549LQ6ZVL6 1849 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 CHD8Q9HCK8 2581 aa11.92□□□□□ -0.5
COL11A1-207ENST00000465209 A0A1W2PRU2 124 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 MTMR11A4FU01 709 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 ZNF263O14978 683 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 CHADO15335 359 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 SDHBP21912 280 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 CCNE1P24864 410 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 HOXC13P31276 330 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 SOX9P48436 509 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 GUCY2FP51841 1108 aa11.91□□□□□ -0.5
COL11A1-207ENST00000465209 NRLP54845 237 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms