RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GLUD2P49448 558 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 MYBPC2Q14324 1141 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 INTS8Q75QN2 995 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 IRF2BP1Q8IU81 584 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 TMEM174Q8WUU8 243 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 CNOT6LQ96LI5 555 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 TTPALQ9BTX7 342 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 HERC2P3Q9BVR0 1158 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 ARMCX3Q9UH62 379 aaPredicted RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 BRWD1Q9NSI6 2320 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 PLXNA3P51805 1871 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 TMEM189-UBE2V1I3L0A0 370 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 C4BPAP04003 597 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 CNPP09543 421 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 PPP1R2P41236 205 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 TAF6P49848 677 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 ARPP19P56211 112 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 UBE3AQ05086 875 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 HYAL1Q12794 435 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 SCARA5Q6ZMJ2 495 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 MRPL43Q8N983 215 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 VN1R2Q8NFZ6 395 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 SLC35C1Q96A29 364 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 SENP8Q96LD8 212 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 MRPL17Q9NRX2 175 aaKnown RBP12.8□□□□□ -0.36
APTX-213ENST00000465003 CHST7Q9NS84 486 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 ANO10Q9NW15 660 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 ITGA11Q9UKX5 1188 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 TEX28O15482 410 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 DSG1Q02413 1049 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 SURF1Q15526 300 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 KIAA0319Q5VV43 1072 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 PALB2Q86YC2 1186 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 HPDLQ96IR7 371 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 APOL5Q9BWW9 433 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 TLE6Q9H808 572 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
APTX-213ENST00000465003 CDH22Q9UJ99 828 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
APTX-213ENST00000465003 CYB561D2O14569 222 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 FGFR3P22607 806 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 RAP1GAPP47736 663 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 CLDN10P78369 228 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 RBP5P82980 135 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 TRPC3Q13507 836 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 NCOA4Q13772 614 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 CLUL1Q15846 466 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 PSMD5Q16401 504 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 ZACNQ401N2 412 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 SEMA4DQ92854 862 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 ZNF560Q96MR9 790 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 CEP63Q96MT8 703 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 BARX2Q9UMQ3 279 aaPredicted RBP12.78□□□□□ -0.36
APTX-213ENST00000465003 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 MAPK13O15264 365 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 LILRB3O75022 631 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 GLP2RO95838 553 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 EPCAMP16422 314 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
APTX-213ENST00000465003 MXI1P50539 228 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
APTX-213ENST00000465003 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 LMAN2LQ9H0V9 348 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
APTX-213ENST00000465003 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms