RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 USTQ9Y2C2 406 aa24■■□□□ 1.43
UBA3-206ENST00000464605 NR2E1Q9Y466 385 aa24■■□□□ 1.43
UBA3-206ENST00000464605 WDR27A2RRH5 827 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 STK4Q13043 487 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 NT5DC4Q86YG4 428 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 GPD1LQ8N335 351 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 FSIP1Q8NA03 581 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 APPL2Q8NEU8 664 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 ZNF461Q8TAF7 563 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 SMG7Q92540 1137 aaKnown RBP23.99■■□□□ 1.43
UBA3-206ENST00000464605 DPP3Q9NY33 737 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 RBAKQ9NYW8 714 aaPredicted RBP23.99■■□□□ 1.43
UBA3-206ENST00000464605 TIMM13Q9Y5L4 95 aaPredicted RBP23.99■■□□□ 1.43
UBA3-206ENST00000464605 UBE4BO95155 1302 aa23.99■■□□□ 1.43
UBA3-206ENST00000464605 H7C4K7 107 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 KIAA0391O15091 583 aaKnown RBP23.98■■□□□ 1.43
UBA3-206ENST00000464605 N4BP1O75113 896 aaKnown RBP23.98■■□□□ 1.43
UBA3-206ENST00000464605 OAZ2O95190 189 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 C8AP07357 584 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 KMT5BQ4FZB7 885 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 NELFCDQ8IXH7 590 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 KIAA0895Q8NCT3 520 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 CXorf38Q8TB03 319 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 BORCS6Q96GS4 357 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 FAM84AQ96KN4 292 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 AGPAT3Q9NRZ7 376 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 HSPBP1Q9NZL4 362 aa23.98■■□□□ 1.43
UBA3-206ENST00000464605 PRR29P0C7W0 189 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 HOXA9P31269 272 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 HOXD11P31277 338 aaPredicted RBP23.97■■□□□ 1.43
UBA3-206ENST00000464605 ZXDAP98168 799 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 UVSSAQ2YD98 709 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 CTXN3Q4LDR2 81 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 CCDC149Q6ZUS6 474 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 CBWD2Q8IUF1 395 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 ZDHHC14Q8IZN3 488 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 SLC7A14Q8TBB6 771 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 SENP8Q96LD8 212 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 PDE11AQ9HCR9 933 aa23.97■■□□□ 1.43
UBA3-206ENST00000464605 MYL1P05976 194 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 HNRNPA1P09651 372 aaKnown RBP eCLIP23.96■■□□□ 1.43
UBA3-206ENST00000464605 TYMPP19971 482 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 LIN9Q5TKA1 542 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 ZNF280DQ6N043 979 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 DSTYKQ6XUX3 929 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 KRBA2Q6ZNG9 492 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 TRIM67Q6ZTA4 783 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 BMP8AQ7Z5Y6 402 aa23.96■■□□□ 1.43
UBA3-206ENST00000464605 CLUHO75153 1309 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 CLIC2O15247 247 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 ZNF202O95125 648 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 SEC24AO95486 1093 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 POU2F2P09086 479 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 ATF2P15336 505 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 PAX3P23760 479 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 SNRPFP62306 86 aaKnown RBP23.95■■□□□ 1.42
UBA3-206ENST00000464605 YWHAHQ04917 246 aaPredicted RBP23.95■■□□□ 1.42
UBA3-206ENST00000464605 PSMD2Q13200 908 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 KNOP1Q1ED39 458 aaKnown RBP23.95■■□□□ 1.42
UBA3-206ENST00000464605 PPM1LQ5SGD2 360 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 RTL10Q7L3V2 364 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 C1orf127Q8N9H9 656 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 TDRD5Q8NAT2 981 aaKnown RBP23.95■■□□□ 1.42
UBA3-206ENST00000464605 MFSD14AQ96MC6 490 aa23.95■■□□□ 1.42
UBA3-206ENST00000464605 ZDBF2Q9HCK1 2354 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 ZNF318Q5VUA4 2279 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 PTPRJQ12913 1337 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 ZNF233A6NK53 670 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 CCL16O15467 120 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 CYP11A1P05108 521 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 ARPP19P56211 112 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 TFAMQ00059 246 aaKnown RBP23.94■■□□□ 1.42
UBA3-206ENST00000464605 DPYDQ12882 1025 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 PTPN21Q16825 1174 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 OTOP3Q7RTS5 596 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 C12orf56Q8IXR9 622 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 NOC3LQ8WTT2 800 aaKnown RBP23.94■■□□□ 1.42
UBA3-206ENST00000464605 KCNH6Q9H252 994 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 PIDD1Q9HB75 910 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 LIMD1Q9UGP4 676 aa23.94■■□□□ 1.42
UBA3-206ENST00000464605 ARHGEF37A1IGU5 675 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 TMEM221A6NGB7 291 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 M0R296 226 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 VNN2O95498 520 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 RPN1P04843 607 aaKnown RBP23.93■■□□□ 1.42
UBA3-206ENST00000464605 TAF6P49848 677 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 TPGS2Q68CL5 300 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 GRASPQ7Z6J2 395 aaPredicted RBP23.93■■□□□ 1.42
UBA3-206ENST00000464605 TCEAL8Q8IYN2 117 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 PLCD3Q8N3E9 789 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 MYADMQ96S97 322 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 EXOC1Q9NV70 894 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 SIX4Q9UIU6 781 aa23.93■■□□□ 1.42
UBA3-206ENST00000464605 ITGB3P05106 788 aa23.92■■□□□ 1.42
UBA3-206ENST00000464605 ODC1P11926 461 aa23.92■■□□□ 1.42
UBA3-206ENST00000464605 NTHL1P78549 312 aa23.92■■□□□ 1.42
UBA3-206ENST00000464605 SNRNP35Q16560 246 aaKnown RBP23.92■■□□□ 1.42
UBA3-206ENST00000464605 LMBRD2Q68DH5 695 aaPredicted RBP23.92■■□□□ 1.42
UBA3-206ENST00000464605 OVOS1Q6IE37 1185 aa23.92■■□□□ 1.42
UBA3-206ENST00000464605 RNF19BQ6ZMZ0 732 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms