RNA–Protein interactions for RNA: ENST00000464429.1

CACNA1D-204, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-204ENST00000464429 PRDM12Q9H4Q4 367 aa9.47□□□□□ -0.89
CACNA1D-204ENST00000464429 NGRNQ9NPE2 291 aaKnown RBP9.47□□□□□ -0.89
CACNA1D-204ENST00000464429 CACNG4Q9UBN1 327 aa9.47□□□□□ -0.89
CACNA1D-204ENST00000464429 SSX2IPQ9Y2D8 614 aa9.47□□□□□ -0.89
CACNA1D-204ENST00000464429 FSD2A1L4K1 749 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 F8W810 466 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 FSCN2O14926 492 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 GRM6O15303 877 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 EFEMP2O95967 443 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ITGB3P05106 788 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRIM49P0CI25 452 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRIM49CP0CI26 452 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 CTSAP10619 480 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 POU3F3P20264 500 aaPredicted RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 GLUD2P49448 558 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 RBP5P82980 135 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 CREMQ03060 361 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 MYO1EQ12965 1108 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 BIRC3Q13489 604 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRPC3Q13507 836 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SMC1AQ14683 1233 aaKnown RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 USP41Q3LFD5 358 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ZACNQ401N2 412 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TDRD10Q5VZ19 366 aaKnown RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 KRT39Q6A163 491 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRAPPC11Q7Z392 1133 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRIM59Q8IWR1 403 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 VPS52Q8N1B4 723 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 CXorf38Q8TB03 319 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SPATA18Q8TC71 538 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 HASPINQ8TF76 798 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SLC35C1Q96A29 364 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 EEF2KMTQ96G04 330 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 MED15Q96RN5 788 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TCF25Q9BQ70 676 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TSPY26PQ9H489 355 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 VRTNQ9H8Y1 702 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ALG13Q9NP73 1137 aaKnown RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ENTPD7Q9NQZ7 604 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 MAGEC2Q9UBF1 373 aaPredicted RBP9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 SIX4Q9UIU6 781 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 NFE2L3Q9Y4A8 694 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 ATG2AQ2TAZ0 1938 aa9.46□□□□□ -0.9
CACNA1D-204ENST00000464429 TRANK1O15050 2925 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 M0QZQ0 153 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 TULP1O00294 542 aaPredicted RBP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PPEF2O14830 753 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PMM2O15305 246 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 P4HA2O15460 535 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PHACTR2O75167 634 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 KRT19P08727 400 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 ODC1P11926 461 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 TYMPP19971 482 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 FGFR3P22607 806 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 ATICP31939 592 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 BRCC3P46736 316 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 LILRA4P59901 499 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 DLG4P78352 724 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 DSG1Q02413 1049 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 CETN1Q12798 172 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 C1orf220Q5T0J3 134 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PLPP4Q5VZY2 271 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 CD300LGQ6UXG3 332 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 C15orf39Q6ZRI6 1047 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 SV2AQ7L0J3 742 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 APPL2Q8NEU8 664 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PTCD2Q8WV60 388 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 PIK3R5Q8WYR1 880 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 TAF4BQ92750 862 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 FAM161BQ96MY7 647 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 POP1Q99575 1024 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 TTPALQ9BTX7 342 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 VN1R3Q9BXE9 311 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 GPR62Q9BZJ7 368 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 NSUN3Q9H649 340 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 CHST7Q9NS84 486 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 MTMR10Q9NXD2 777 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 DSEQ9UL01 958 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 AGAP1Q9UPQ3 857 aa9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1D-204ENST00000464429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.44□□□□□ -0.9
CACNA1D-204ENST00000464429 KPNA7A9QM74 516 aa9.44□□□□□ -0.9
CACNA1D-204ENST00000464429 C4BPAP04003 597 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-204ENST00000464429 FOSL2P15408 326 aa9.44□□□□□ -0.9
CACNA1D-204ENST00000464429 GCLMP48507 274 aa9.44□□□□□ -0.9
CACNA1D-204ENST00000464429 ZNF165P49910 485 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms