RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 H2AFVQ71UI9 128 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 ZNF677Q86XU0 584 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 DDX1Q92499 740 aaKnown RBP20.34■□□□□ 0.85
CCDC78-206ENST00000463539 ZNF333Q96JL9 665 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 BCO2Q9BYV7 579 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 RNF19AQ9NV58 838 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 RALGAPA2Q2PPJ7 1873 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 TMCO5BA8MYB1 307 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 FANCGO15287 622 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 TLR3O15455 904 aaKnown RBP20.34■□□□□ 0.85
CCDC78-206ENST00000463539 MGEA5O60502 916 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 CD4P01730 458 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 MMEP08473 750 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 ZNF132P52740 706 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 FMO1Q01740 532 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 BFSP2Q13515 415 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 DSC3Q14574 896 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 SLC35F6Q8N357 371 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 INTUQ9ULD6 942 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 SELPP16109 830 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 GNA15P30679 374 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 TNNC1P63316 161 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 MBTPS1Q14703 1052 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 LRRC8DQ7L1W4 858 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 DNAAF5Q86Y56 855 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 LRRC52Q8N7C0 313 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 ZFP42Q96MM3 310 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 ADAM2Q99965 735 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 CRISPLD2Q9H0B8 497 aa20.33■□□□□ 0.85
CCDC78-206ENST00000463539 MEIS3P2A8K0S8 358 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 PQBP1O60828 265 aaKnown RBP20.32■□□□□ 0.84
CCDC78-206ENST00000463539 CALCAP01258 141 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 TFRCP02786 760 aaKnown RBP20.32■□□□□ 0.84
CCDC78-206ENST00000463539 CYP3A5P20815 502 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 MLH1P40692 756 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 C9orf57Q5W0N0 161 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 MRPL10Q7Z7H8 261 aaKnown RBP20.32■□□□□ 0.84
CCDC78-206ENST00000463539 PCDHB18PQ96TA0 734 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 SMYD3Q9H7B4 428 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 CYP3A43Q9HB55 503 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 TAS2R14Q9NYV8 317 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 CITO14578 2027 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 A0A0U1RQF3 1178 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 PTGESO14684 152 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 ZNF623O75123 536 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 ATF7P17544 494 aaPredicted RBP20.32■□□□□ 0.84
CCDC78-206ENST00000463539 RAP1GAPP47736 663 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 RNF10Q8N5U6 811 aaKnown RBP20.32■□□□□ 0.84
CCDC78-206ENST00000463539 LPPQ93052 612 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 NOX5Q96PH1 765 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 RPS6KC1Q96S38 1066 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 GIT1Q9Y2X7 761 aa20.32■□□□□ 0.84
CCDC78-206ENST00000463539 BTNL10A8MVZ5 291 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 PPEF2O14830 753 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 TACC1O75410 805 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 MOCS3O95396 460 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 GZMAP12544 262 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 SKIP12755 728 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 ATN1P54259 1190 aaPredicted RBP20.31■□□□□ 0.84
CCDC78-206ENST00000463539 GALCP54803 685 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 NAP1L1P55209 391 aaKnown RBP20.31■□□□□ 0.84
CCDC78-206ENST00000463539 RNF169Q8NCN4 708 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 TRIM58Q8NG06 486 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 ARMC5Q96C12 935 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 ALS2CR12Q96Q35 445 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 GAD1Q99259 594 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 PUF60Q9UHX1 559 aaKnown RBP20.31■□□□□ 0.84
CCDC78-206ENST00000463539 SALL4Q9UJQ4 1053 aa20.31■□□□□ 0.84
CCDC78-206ENST00000463539 ANO9A1A5B4 782 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 CTAGE9A4FU28 777 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 THAP12O43422 761 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 TMEM253P0C7T8 217 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 CDH8P55286 799 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PKN2Q16513 984 aaKnown RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 ZNF394Q53GI3 561 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 AGMOQ6ZNB7 445 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 CTNNBL1Q8WYA6 563 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PGBD4Q96DM1 585 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 ZNF560Q96MR9 790 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PPP1R10Q96QC0 940 aaKnown RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 SDCBP2Q9H190 292 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 ISCUQ9H1K1 167 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PDCL3Q9H2J4 239 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 CAPN6Q9Y6Q1 641 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PITPNM1O00562 1244 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 BUB1O43683 1085 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 RTN2O75298 545 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 FTLP02792 175 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 ABCB4P21439 1286 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 IBSPP21815 317 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 PNPLA4P41247 253 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 MNX1P50219 401 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 LBX1P52954 281 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 SOX4Q06945 474 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 NAPGQ99747 312 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 FAM124BQ9H5Z6 455 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-206ENST00000463539 GOLGA2P5Q9HBQ8 144 aa20.3■□□□□ 0.84
CCDC78-206ENST00000463539 FAM170AA1A519 330 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms