RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	C5orf42	Q9H799	3197 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	C2orf16	Q68DN1	1984 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970		H7C4K7	107 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	PDXK	O00764	312 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	ADAM12	O43184	909 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	PHACTR2	O75167	634 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	ODC1	P11926	461 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	SP100	P23497	879 aa	Predicted RBP	10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	TAF6	P49848	677 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	POU5F1	Q01860	360 aa	Known RBP	10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	CYP24A1	Q07973	514 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	SV2C	Q496J9	727 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	LIN9	Q5TKA1	542 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	SYCE2	Q6PIF2	218 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	KREMEN2	Q8NCW0	462 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	OR5B17	Q8NGF7	314 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	MSLNL	Q96KJ4	702 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	SENP8	Q96LD8	212 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	ZNF560	Q96MR9	790 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	GSDMA	Q96QA5	445 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	POP1	Q99575	1024 aa	Known RBP	10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	CLSTN3	Q9BQT9	956 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	KCTD10	Q9H3F6	313 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	FNIP2	Q9P278	1114 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	CDH22	Q9UJ99	828 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	FRMD4B	Q9Y2L6	1034 aa		10.38	□□□□□ -0.75
PSMD4-208	ENST00000462970	PTPRJ	Q12913	1337 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	PIR	O00625	290 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CYB561D2	O14569	222 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	SYN3	O14994	580 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	SPTLC1	O15269	473 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	TGM5	O43548	720 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CPB1	P15086	417 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	HOXB8	P17481	243 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	NR2F2	P24468	414 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CASP4	P49662	377 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CDR1	P51861	262 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	LILRA4	P59901	499 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	RBP5	P82980	135 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	YWHAH	Q04917	246 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	BIRC3	Q13489	604 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	STIM1	Q13586	685 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	PSMD6	Q15008	389 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	DUOXA2	Q1HG44	320 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	KLHL10	Q6JEL2	608 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	ZNF280D	Q6N043	979 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	METTL23	Q86XA0	190 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	NT5DC4	Q86YG4	428 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	C12orf56	Q8IXR9	622 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	PLCD3	Q8N3E9	789 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	GUF1	Q8N442	669 aa	Known RBP	10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	C1orf127	Q8N9H9	656 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	SMRP1	Q8NCR6	262 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	DOCK6	Q96HP0	2047 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CGRRF1	Q99675	332 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	TSG101	Q99816	390 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	SFXN1	Q9H9B4	322 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	PIDD1	Q9HB75	910 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	INTS13	Q9NVM9	706 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	MTRR	Q9UBK8	725 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	DPP7	Q9UHL4	492 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	FBXL5	Q9UKA1	691 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	MAN1B1	Q9UKM7	699 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	ITGA11	Q9UKX5	1188 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	POLI	Q9UNA4	740 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	TSC2	P49815	1807 aa		10.37	□□□□□ -0.75
PSMD4-208	ENST00000462970	CCDC195	A0A1B0GUA6	201 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	ANO9	A1A5B4	782 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	ARHGEF37	A1IGU5	675 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	KPNA7	A9QM74	516 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	GOLGA6L22	H0YM25	854 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970		M0QZQ0	153 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	PRRG1	O14668	218 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	RFPL2	O75678	378 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	KRT13	P13646	458 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	RPL13	P26373	211 aa	Known RBP	10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	ELF1	P32519	619 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	PNPLA4	P41247	253 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	PRCP	P42785	496 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRPC3	Q13507	836 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	KCNC3	Q14003	757 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	CBX2	Q14781	532 aa	Predicted RBP	10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	PPM1L	Q5SGD2	360 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	ATAT1	Q5SQI0	421 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	OVOS1	Q6IE37	1185 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	TMEM184A	Q6ZMB5	413 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	WDR49	Q8IV35	697 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	GPR65	Q8IYL9	337 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	SMG7	Q92540	1137 aa	Known RBP	10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	EEF2KMT	Q96G04	330 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	RPGRIP1	Q96KN7	1286 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	RIPOR3	Q96MK2	946 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	S1PR5	Q9H228	398 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	MMRN2	Q9H8L6	949 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	BACE2	Q9Y5Z0	518 aa		10.36	□□□□□ -0.75
PSMD4-208	ENST00000462970	PSMA7	O14818	248 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	CCL16	O15467	120 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	HUS1	O60921	280 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms