RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CSPG5O95196 566 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 CAVIN2O95810 425 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 HLA-DRAP01903 254 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 SOD2P04179 222 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 ATP1A3P13637 1013 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 EEF1GP26641 437 aaKnown RBP20.68■□□□□ 0.9
XPA-202ENST00000462523 IRS1P35568 1242 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 UBE3AQ05086 875 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 ADGRE1Q14246 886 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 RTP2Q5QGT7 225 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 FAM200AQ8TCP9 573 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 HPDLQ96IR7 371 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 ZNF560Q96MR9 790 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 TUBGCP2Q9BSJ2 902 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 HERC2P3Q9BVR0 1158 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 ZBP1Q9H171 429 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 CHST7Q9NS84 486 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 MAGEC2Q9UBF1 373 aaPredicted RBP20.68■□□□□ 0.9
XPA-202ENST00000462523 KPNA7A9QM74 516 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 STX10O60499 249 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 PHACTR2O75167 634 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 TKTP29401 623 aaKnown RBP20.68■□□□□ 0.9
XPA-202ENST00000462523 PNPLA4P41247 253 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 MTIF2P46199 727 aaKnown RBP20.68■□□□□ 0.9
XPA-202ENST00000462523 KRT31Q15323 416 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 FAM171A1Q5VUB5 890 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 APTXQ7Z2E3 356 aaKnown RBP20.68■□□□□ 0.9
XPA-202ENST00000462523 AUTS2Q8WXX7 1259 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 PI4K2AQ9BTU6 479 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 COQ4Q9Y3A0 265 aa20.68■□□□□ 0.9
XPA-202ENST00000462523 SMTNL1A8MU46 457 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 FSCN2O14926 492 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 AFPP02771 609 aaKnown RBP20.67■□□□□ 0.9
XPA-202ENST00000462523 FGFR3P22607 806 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 PIK3CAP42336 1068 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 TRPC3Q13507 836 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 MAN2A1Q16706 1144 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 SV2CQ496J9 727 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 SENP8Q96LD8 212 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 VRTNQ9H8Y1 702 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.67■□□□□ 0.93e-14■■■■■ 127.3
XPA-202ENST00000462523 TLR9Q9NR96 1032 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 GDAP2Q9NXN4 497 aa20.67■□□□□ 0.9
XPA-202ENST00000462523 PMM2O15305 246 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 STAU1O95793 577 aaKnown RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 ASS1P00966 412 aaKnown RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 CTSAP10619 480 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 MYL7Q01449 175 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 KIAA0319Q5VV43 1072 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 SPOPLQ6IQ16 392 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 DEFB123Q8N688 67 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 FBXL13Q8NEE6 735 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 TCF25Q9BQ70 676 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 APOBEC3GQ9HC16 384 aaKnown RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 TAB2Q9NYJ8 693 aa20.66■□□□□ 0.9
XPA-202ENST00000462523 LIMA1Q9UHB6 759 aaKnown RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 PUF60Q9UHX1 559 aaKnown RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 TIMM13Q9Y5L4 95 aaPredicted RBP20.66■□□□□ 0.9
XPA-202ENST00000462523 BECN2A8MW95 431 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 TRAPPC3O43617 180 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 LILRB3O75022 631 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 PRKCSHP14314 528 aaPredicted RBP20.65■□□□□ 0.9
XPA-202ENST00000462523 ATICP31939 592 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 DSG1Q02413 1049 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 ELAVL2Q12926 359 aaKnown RBP20.65■□□□□ 0.9
XPA-202ENST00000462523 MYO1EQ12965 1108 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 USP41Q3LFD5 358 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.65■□□□□ 0.9
XPA-202ENST00000462523 LIMS2Q7Z4I7 341 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 CEP57Q86XR8 500 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 LMO3Q8TAP4 145 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 GUCD1Q96NT3 240 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 LMAN2LQ9H0V9 348 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 RAB20Q9NX57 234 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 PCDHB8Q9UN66 801 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 SNX9Q9Y5X1 595 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 MYO7AQ13402 2215 aa20.65■□□□□ 0.9
XPA-202ENST00000462523 HIDE1A8MVS5 230 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 CYB561D2O14569 222 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 GLUD2P49448 558 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 PTPN14Q15678 1187 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 ZNF699Q32M78 642 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 VWA3BQ502W6 1294 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 PLPP4Q5VZY2 271 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 PRSS55Q6UWB4 352 aaPredicted RBP20.64■□□□□ 0.9
XPA-202ENST00000462523 DSTYKQ6XUX3 929 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 GAS2L3Q86XJ1 694 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 MRPL38Q96DV4 380 aaKnown RBP20.64■□□□□ 0.9
XPA-202ENST00000462523 TTPALQ9BTX7 342 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 NDST4Q9H3R1 872 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 STK39Q9UEW8 545 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 L1RE1Q9UN81 338 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 POLIQ9UNA4 740 aa20.64■□□□□ 0.9
XPA-202ENST00000462523 XIRP2A4UGR9 3374 aa20.64■□□□□ 0.89
XPA-202ENST00000462523 LRRC10BA6NIK2 292 aa20.63■□□□□ 0.89
XPA-202ENST00000462523 C2CD2LO14523 706 aa20.63■□□□□ 0.89
XPA-202ENST00000462523 SYN3O14994 580 aa20.63■□□□□ 0.89
XPA-202ENST00000462523 P4HA2O15460 535 aa20.63■□□□□ 0.89
XPA-202ENST00000462523 PAX3P23760 479 aa20.63■□□□□ 0.89
XPA-202ENST00000462523 MRPL58Q14197 206 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms