RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 HTR4Q13639 388 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SF3A2Q15428 464 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SYCP1Q15431 976 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CEP55Q53EZ4 464 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 PRR16Q569H4 304 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CYP26C1Q6V0L0 522 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 PLA2G4DQ86XP0 818 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 LRRC43Q8N309 656 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 GOLGA6L1Q8N7Z2 621 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 GIMAP8Q8ND71 665 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CMASQ8NFW8 434 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CRYGNQ8WXF5 182 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SEPT1Q8WYJ6 367 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 TNFRSF25Q93038 417 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 GPRASP2Q96D09 838 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CDHR1Q96JP9 859 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 INPP4AQ96PE3 977 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 NAP1L4Q99733 375 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SDF4Q9BRK5 362 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SCNM1Q9BWG6 230 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 SMARCAD1Q9H4L7 1026 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 KCNH7Q9NS40 1196 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 DONSONQ9NYP3 566 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 CCDC39Q9UFE4 941 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 UBIAD1Q9Y5Z9 338 aa6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 MTCL1Q9Y4B5 1905 aaKnown RBP6.6□□□□□ -1.35
SMARCC1-204ENST00000462198 TENM4Q6N022 2769 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SMIM35A0A1B0GVV1 85 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 DDX39AO00148 427 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 MEIS1O00470 390 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 GIPC1O14908 333 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 INPPL1O15357 1258 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 CAPN5O15484 640 aaPredicted RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 STX6O43752 255 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 MARCH6O60337 910 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 TDP2O95551 362 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 IGHA1P01876 353 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 CNPP09543 421 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 ZNF806P0C7X5 589 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 MYBP10242 640 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 GCFC2P16383 781 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 U2AF2P26368 475 aaKnown RBP eCLIP6.59□□□□□ -1.351e-6■■■■□ 22.8
SMARCC1-204ENST00000462198 TARSP26639 723 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 CIITAP33076 1130 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 PSMA6P60900 246 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SKOR1P84550 965 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SRSF5Q13243 272 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 PPP2R5DQ14738 602 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SETDB1Q15047 1291 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 CCDC6Q16204 474 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 EARS2Q5JPH6 523 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 PARM1Q6UWI2 310 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 NIPA1Q7RTP0 329 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SLC9A9Q8IVB4 645 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 NOSTRINQ8IVI9 506 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 RNF169Q8NCN4 708 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 TRAPPC12Q8WVT3 735 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 TMEM40Q8WWA1 233 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SMG7Q92540 1137 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 FGF14Q92915 247 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SENP7Q9BQF6 1050 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 ZNF577Q9BSK1 485 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 DDX25Q9UHL0 483 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 TCEAL9Q9UHQ7 104 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SERTAD1Q9UHV2 236 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 ZDHHC9Q9Y397 364 aa6.59□□□□□ -1.35
SMARCC1-204ENST00000462198 SHROOM3Q8TF72 1996 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 F5P12259 2224 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 SPAG17Q6Q759 2223 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 LAMA5O15230 3695 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 IGLV3-22A0A075B6J6 115 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 CYP3A7-CYP3A51PA0A087WV96 503 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 IPO5O00410 1097 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ATP9AO75110 1047 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 RFPL2O75678 378 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MBD3O95983 291 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 LIG1P18858 919 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 CYP3A7P24462 503 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MCM7P33993 719 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 CNR2P34972 360 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TRAPPC10P48553 1259 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 NOVA1P51513 510 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 PFKPQ01813 784 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ADCY1Q08828 1119 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 PLCB4Q15147 1175 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF174Q15697 407 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms