RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 KRT75O95678 551 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 MAPK4P31152 587 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 ART3Q13508 389 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 KRT81Q14533 505 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 DNERQ8NFT8 737 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 SYN2Q92777 582 aaPredicted RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 GLG1Q92896 1179 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 PPWD1Q96BP3 646 aaKnown RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 CENPTQ96BT3 561 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 ERP27Q96DN0 273 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 CLMNQ96JQ2 1002 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 DNAJC7Q99615 494 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 PDCD2LQ9BRP1 358 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 WNT8AQ9H1J5 351 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 GBA2Q9HCG7 927 aaPredicted RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 AGO4Q9HCK5 861 aaKnown RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 JPH1Q9HDC5 661 aaPredicted RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 DBR1Q9UK59 544 aaKnown RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 GINS2Q9Y248 185 aa6.54□□□□□ -1.36
VPS13D-202ENST00000460333 DDX60LQ5H9U9 1706 aaKnown RBP6.54□□□□□ -1.36
VPS13D-202ENST00000460333 EIF4E1BA6NMX2 242 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PSMD10O75832 226 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ARP10275 920 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 YWHABP31946 246 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PPM1FP49593 454 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NXNQ6DKJ4 435 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ELMSAN1Q6PJG2 1045 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 LRRC34Q8IZ02 419 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KIAA0895Q8NCT3 520 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 LRRN4CLQ8ND94 238 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KLRG1Q96E93 195 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 C12orf42Q96LP6 360 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SERPINB12Q96P63 405 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CHP1Q99653 195 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NUDT12Q9BQG2 462 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PARVBQ9HBI1 364 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 TUBA8Q9NY65 449 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ZNF541Q9H0D2 1346 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NPHP3-ACAD11A0A0J9YXS1 232 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 RAD51CO43502 376 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 MAPTP10636 758 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SERPINB10P48595 397 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SLC12A3P55017 1021 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PPATQ06203 517 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PGM5Q15124 567 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NOL9Q5SY16 702 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ZBTB8OSQ8IWT0 167 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PROCA1Q8NCQ7 364 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 HPS3Q969F9 1004 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PARK7Q99497 189 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 MTRQ99707 1265 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 GLIS2Q9BZE0 524 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SEMA6BQ9H3T3 888 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CCDC134Q9H6E4 229 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ELP3Q9H9T3 547 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 C17orf75Q9HAS0 396 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PFDN4Q9NQP4 134 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 G3BP2Q9UN86 482 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 TRIM33Q9UPN9 1127 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 FAM47DPA6NHR8 397 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ADAMTS3O15072 1205 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CLIC2O15247 247 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ADCY3O60266 1144 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PHF2O75151 1096 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 WFS1O76024 890 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 DDNO94850 711 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SYF2O95926 243 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NSFP46459 744 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 GCLCP48506 637 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 LIG4P49917 911 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KCNH2Q12809 1159 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SNAPC2Q13487 334 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 RRP1BQ14684 758 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KYNUQ16719 465 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ATXN2LQ8WWM7 1075 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 NSL1Q96IY1 281 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 GORASP1Q9BQQ3 440 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KIAA1586Q9HCI6 787 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 MRPL47Q9HD33 250 aaKnown RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-202ENST00000460333 QSER1Q2KHR3 1735 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CFAP69A5D8W1 941 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 COPEO14579 308 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 DGAT1O75907 488 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 KRT10P13645 584 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 CACNA2D1P54289 1103 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 ARL4CP56559 192 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 STX1BP61266 288 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 PDE1BQ01064 536 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 RIPK1Q13546 671 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 LRRC14Q15048 493 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
VPS13D-202ENST00000460333 GEN1Q17RS7 908 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms