RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF568Q3ZCX4 644 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 B3GNT9Q6UX72 402 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 HOOK3Q86VS8 718 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 SLC13A5Q86YT5 568 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 CCDC197Q8NCU1 140 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 LRRD1A4D1F6 860 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 TRAPPC3O43617 180 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 GNAT1P11488 350 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 CHRNA3P32297 505 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 TNFSF9P41273 254 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 CLCN3P51790 818 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 ZNF280AP59817 542 aaPredicted RBP16.33■□□□□ 0.21
LMNB1-203ENST00000460265 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 RUBCNQ92622 972 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 VPS33BQ9H267 617 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.21
LMNB1-203ENST00000460265 RARAP10276 462 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 CHRNB2P17787 502 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 UBA1P22314 1058 aaKnown RBP16.33■□□□□ 0.2
LMNB1-203ENST00000460265 KRT17Q04695 432 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 WDR72Q3MJ13 1102 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 SLC39A4Q6P5W5 647 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 RAPGEF5Q92565 580 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 PHF2O75151 1096 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 LYPLA2O95372 231 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 PYGLP06737 847 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 GZMAP12544 262 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 MXRA7P84157 204 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 HELQQ8TDG4 1101 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 P3H4Q92791 437 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 KIAA1586Q9HCI6 787 aa16.33■□□□□ 0.2
LMNB1-203ENST00000460265 DDX3YO15523 660 aaKnown RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 LDHAP00338 332 aaKnown RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 TNNC2P02585 160 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 KRT10P13645 584 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ATF2P15336 505 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 GTF2H1P32780 548 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 PTENP60484 403 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 DNAJC24Q6P3W2 148 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ABHD15Q6UXT9 468 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 PRUNE1Q86TP1 453 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 APOL6Q9BWW8 343 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 STK38LQ9Y2H1 464 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 CTCFP49711 727 aaPredicted RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 MYL6P60660 151 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 LACTB2Q53H82 288 aaPredicted RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 CYP4A22Q5TCH4 519 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 PRELID2Q8N945 189 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 RDM1Q8NG50 284 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 SPIRE2Q8WWL2 714 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ZNF570Q96NI8 536 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 OSBPL1AQ9BXW6 950 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 KDM4CQ9H3R0 1056 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 C17orf75Q9HAS0 396 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 PCSK1NQ9UHG2 260 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 PRKCBP05771 671 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 RALAP11233 206 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 GARTP22102 1010 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 LRRC14Q15048 493 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ATP13A4Q4VNC1 1196 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 CRELD2Q6UXH1 353 aaPredicted RBP16.32■□□□□ 0.2
LMNB1-203ENST00000460265 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 CCT6BQ92526 530 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 RNF19AQ9NV58 838 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 ANAPC5Q9UJX4 755 aa16.32■□□□□ 0.2
LMNB1-203ENST00000460265 GOLGA8MH3BSY2 632 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 PODXLO00592 558 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 AHCYL1O43865 530 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 KRT1P04264 644 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 RPL21P46778 160 aaKnown RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 CUL2Q13617 745 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 TAF11Q15544 211 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 NFIL3Q16649 462 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 SPATA31C2B4DYI2 1134 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 RASGRF2O14827 1237 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 CFHP08603 1231 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 COILP38432 576 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-203ENST00000460265 ZNF844Q08AG5 666 aa16.31■□□□□ 0.2
LMNB1-203ENST00000460265 TMEM62Q0P6H9 643 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms