RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 PCDHB8Q9UN66 801 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 CFAP54Q96N23 3096 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 TRIP11Q15643 1979 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 ZFHX2Q9C0A1 2572 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 H0Y858 1186 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 KLRC4O43908 158 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 IGFBP6P24592 240 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 OR1D2P34982 312 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 RAB33AQ14088 237 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 KNOP1Q1ED39 458 aaKnown RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 BMT2Q1RMZ1 405 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 VARS2Q5ST30 1063 aaKnown RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 LILRA6Q6PI73 481 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 TMC5Q6UXY8 1006 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 C15orf39Q6ZRI6 1047 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 USP37Q86T82 979 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 CMASQ8NFW8 434 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 GOLPH3LQ9H4A5 285 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 AGPAT3Q9NRZ7 376 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 DPP3Q9NY33 737 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 HSPBP1Q9NZL4 362 aa16.17■□□□□ 0.18
ATG4B-213ENST00000460211 HOOK1Q9UJC3 728 aaKnown RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 R3HCC1Q9Y3T6 440 aaKnown RBP16.17■□□□□ 0.18
ATG4B-213ENST00000460211 SPATA31D3P0C874 917 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 HOXD13P35453 343 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
ATG4B-213ENST00000460211 LIN9Q5TKA1 542 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 C9orf57Q5W0N0 161 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 SPATA31D4Q6ZUB0 917 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 OXCT2Q9BYC2 517 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-213ENST00000460211 ZDHHC7Q9NXF8 308 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 NR2E1Q9Y466 385 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 CDY1Q9Y6F8 540 aa16.16■□□□□ 0.18
ATG4B-213ENST00000460211 TCHHQ07283 1943 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 M0QZQ0 153 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 PIRO00625 290 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 TGFB1I1O43294 461 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 ELF1P32519 619 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 PNPLA4P41247 253 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 PLXNA3P51805 1871 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 LILRA4P59901 499 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 YWHAHQ04917 246 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-213ENST00000460211 STK4Q13043 487 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 CTXN3Q4LDR2 81 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 ZNF280DQ6N043 979 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-213ENST00000460211 XXYLT1Q8NBI6 393 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 RHOBTB2Q9BYZ6 727 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 PIDD1Q9HB75 910 aa16.15■□□□□ 0.18
ATG4B-213ENST00000460211 ANO9A1A5B4 782 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 CLIC2O15247 247 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 ZMYND10O75800 440 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 RHOBTB3O94955 611 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 TMEM191BP0C7N4 346 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 ODC1P11926 461 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 TYMPP19971 482 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATG4B-213ENST00000460211 TAF6P49848 677 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 CYP2J2P51589 502 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 FAM160A1Q05DH4 1040 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 DPYDQ12882 1025 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.17
ATG4B-213ENST00000460211 KCNB1Q14721 858 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 UVSSAQ2YD98 709 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 SLC8B1Q6J4K2 584 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 METTL23Q86XA0 190 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 EFCAB13Q8IY85 973 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
ATG4B-213ENST00000460211 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 ZNF560Q96MR9 790 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 FNBP1Q96RU3 617 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 SMOC2Q9H3U7 446 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 RMND1Q9NWS8 449 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 DSEQ9UL01 958 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 MYO15AQ9UKN7 3530 aa16.14■□□□□ 0.17
ATG4B-213ENST00000460211 C2CD4DB7Z1M9 353 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 ADAM12O43184 909 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 EXOC3O60645 756 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
ATG4B-213ENST00000460211 OAZ2O95190 189 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 SMC2O95347 1197 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 TNNC2P02585 160 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 HNRNPA1P09651 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
ATG4B-213ENST00000460211 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 ARPP19P56211 112 aa16.13■□□□□ 0.17
ATG4B-213ENST00000460211 SNRNP35Q16560 246 aaKnown RBP16.13■□□□□ 0.17
ATG4B-213ENST00000460211 DUOXA2Q1HG44 320 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms