RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 EXT2Q93063 718 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 CAVIN3Q969G5 261 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SPATS2LQ9NUQ6 558 aaKnown RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 GARTP22102 1010 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SLC12A1Q13621 1099 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SAMD7Q7Z3H4 446 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SAMD3Q8N6K7 520 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 CYP2W1Q8TAV3 490 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 MTMR9Q96QG7 549 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 TRPA1O75762 1119 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 RASSF3Q86WH2 238 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 TMC2Q8TDI7 906 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 ATP8B4Q8TF62 1192 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SERPINB12Q96P63 405 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 NT5C1AQ9BXI3 368 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 TLR10Q9BXR5 811 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 DPEP1P16444 411 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 KRT80Q6KB66 452 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 C3orf62Q6ZUJ4 267 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 FAM86B1E9PN63 330 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 FAM86B2P0C5J1 330 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 ZNF200P98182 395 aaPredicted RBP15.52■□□□□ 0.08
PTPRU-205ENST00000460170 CDC42EP1Q00587 391 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 SMAD1Q15797 465 aaKnown RBP15.52■□□□□ 0.08
PTPRU-205ENST00000460170 KCNK18Q7Z418 384 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 C1orf131Q8NDD1 294 aaKnown RBP15.52■□□□□ 0.08
PTPRU-205ENST00000460170 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
PTPRU-205ENST00000460170 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 CCT8L1PA6NM43 557 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 ZNF189O75820 626 aaPredicted RBP15.52■□□□□ 0.08
PTPRU-205ENST00000460170 C4orf19Q8IY42 314 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 GTSE1Q9NYZ3 720 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 CHMP2BQ9UQN3 213 aa15.52■□□□□ 0.08
PTPRU-205ENST00000460170 MYO5BQ9ULV0 1848 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 HBP1O60381 514 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 HNRNPCL1O60812 293 aaKnown RBP15.52■□□□□ 0.07
PTPRU-205ENST00000460170 SLC25A27O95847 323 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 SMTNL2Q2TAL5 461 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 FBXO25Q8TCJ0 367 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 TAS1R2Q8TE23 839 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 SLC35C1Q96A29 364 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 TSSK1BQ9BXA7 367 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 SIK2Q9H0K1 926 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 TMBIM4Q9HC24 238 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 PAK5Q9P286 719 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 NFIBO00712 420 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 PSTPIP1O43586 416 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 EFCAB12Q6NXP0 572 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 MYCBPAPQ8TBZ2 947 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 PGBD4Q96DM1 585 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 MAGEB5Q9BZ81 275 aa15.52■□□□□ 0.07
PTPRU-205ENST00000460170 SPAG6O75602 509 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 GRAP2O75791 330 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 HSPA8P11142 646 aaKnown RBP15.51■□□□□ 0.07
PTPRU-205ENST00000460170 RAD23BP54727 409 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 PCNX4Q63HM2 1172 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 GH1P01241 217 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 TFRCP02786 760 aaKnown RBP15.51■□□□□ 0.07
PTPRU-205ENST00000460170 RARGP13631 454 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 ESRRGP62508 458 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 OR6J1Q8NGC5 347 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 HAUS8Q9BT25 410 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 PJA2O43164 708 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 XPAP23025 273 aaPredicted RBP15.51■□□□□ 0.07
PTPRU-205ENST00000460170 POU5F1BQ06416 359 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 DNAAF5Q86Y56 855 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 TTC8Q8TAM2 541 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 ATG4AQ8WYN0 398 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 RAPGEF5Q92565 580 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 NPHS2Q9NP85 383 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 HACL1Q9UJ83 578 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 SCFD2Q8WU76 684 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 ERAP1Q9NZ08 941 aa15.51■□□□□ 0.07
PTPRU-205ENST00000460170 OGTO15294 1046 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 ATP9BO43861 1147 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 SLITRK3O94933 977 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 ST13P4Q8IZP2 240 aaPredicted RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 APPL2Q8NEU8 664 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 POP1Q99575 1024 aaKnown RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 EPAS1Q99814 870 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 RANBP17Q9H2T7 1088 aaKnown RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 GAS2O43903 313 aaKnown RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 KLRC4O43908 158 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 TCF7P36402 384 aaPredicted RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 POLE2P56282 527 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 KIF19Q2TAC6 998 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 CYP4A22Q5TCH4 519 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 OTOP1Q7RTM1 612 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 SYTL5Q8TDW5 730 aaPredicted RBP15.5■□□□□ 0.07
PTPRU-205ENST00000460170 ERP27Q96DN0 273 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 PDCD2LQ9BRP1 358 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 DRC3Q9H069 523 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 SIK3Q9Y2K2 1263 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 GNGT2O14610 69 aa15.5■□□□□ 0.07
PTPRU-205ENST00000460170 SASH3O75995 380 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms