RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ZSCAN16Q9H4T2 348 aaPredicted RBP18.2■□□□□ 0.5
TMEM50B-205ENST00000459909 C2orf42Q9NWW7 574 aa18.2■□□□□ 0.5
TMEM50B-205ENST00000459909 CEP295Q9C0D2 2601 aa18.2■□□□□ 0.5
TMEM50B-205ENST00000459909 NCANO14594 1321 aa18.2■□□□□ 0.5
TMEM50B-205ENST00000459909 ARID2Q68CP9 1835 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 CCDC163A0A0D9SF12 145 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 TMEM8BA6NDV4 472 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 SLC38A8A6NNN8 435 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 RPP40O75818 363 aaKnown RBP18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 SEC24AO95486 1093 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 TRAPPC10P48553 1259 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 EPHA5P54756 1037 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 ARPP19P56211 112 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 PRPF4BQ13523 1007 aaKnown RBP18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 RILPL1Q5EBL4 403 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 TPGS2Q68CL5 300 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 RALGPS2Q86X27 583 aaPredicted RBP18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 C3orf58Q8NDZ4 430 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 FAM200AQ8TCP9 573 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 IPO9Q96P70 1041 aaKnown RBP18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 C2orf40Q9H1Z8 148 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 ASAH2Q9NR71 780 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 GDAQ9Y2T3 454 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 TICRRQ7Z2Z1 1910 aa18.19■□□□□ 0.5
TMEM50B-205ENST00000459909 SPECC1L-ADORA2AF8WAN1 911 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 H7C4K7 107 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 WNT7AO00755 349 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 SYN3O14994 580 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 NEMFO60524 1076 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 USO1O60763 962 aaKnown RBP18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 F13A1P00488 732 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 MYL4P12829 197 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 CTHP32929 405 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 SOX9P48436 509 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 FCHO2Q0JRZ9 810 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 NBR1Q14596 966 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 ZNF174Q15697 407 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 MAPK6Q16659 721 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 RNF43Q68DV7 783 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 KBTBD6Q86V97 674 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 SLITRK6Q9H5Y7 841 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 CEP72Q9P209 647 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 MAFFQ9ULX9 164 aa18.18■□□□□ 0.5
TMEM50B-205ENST00000459909 GREB1Q4ZG55 1949 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 SPEGQ15772 3267 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 ACKR2O00590 384 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 AKAP3O75969 853 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 PRKCBP05771 671 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 GJA1P17302 382 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 HOXC13P31276 330 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 MPLP40238 635 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 NOVA1P51513 510 aaKnown RBP18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 TWF1Q12792 350 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 CCINQ13939 588 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 TEAD2Q15562 447 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 DCAF4L1Q3SXM0 396 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 MAEAQ7L5Y9 396 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 GOLGA2P5Q9HBQ8 144 aa18.17■□□□□ 0.5
TMEM50B-205ENST00000459909 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 NUCB2P80303 420 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 MRPL58Q14197 206 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 CALCRLQ16602 461 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 FOXD4L6Q3SYB3 417 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 FOXD4L3Q6VB84 417 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 MCPH1Q8NEM0 835 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 PIGOQ8TEQ8 1089 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 RSPRY1Q96DX4 576 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 ZC3H10Q96K80 434 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 TMEM121BQ9BXQ6 578 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 SMOC1Q9H4F8 434 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 AFF4Q9UHB7 1163 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 FBXL5Q9UKA1 691 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 PCDHB6Q9Y5E3 794 aa18.16■□□□□ 0.5
TMEM50B-205ENST00000459909 ZZEF1O43149 2961 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 SOBPA7XYQ1 873 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 EXTL3O43909 919 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 FOXC1Q12948 553 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 PON2Q15165 354 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 EEF1DP3Q658K8 133 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 SHKBP1Q8TBC3 707 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 CCDC113Q9H0I3 377 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
TMEM50B-205ENST00000459909 SMIM28A0A1B0GU29 152 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 DDIT3P35638 169 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 PXNP49023 591 aaPredicted RBP18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 ZNF252P-AS1Q0IIN9 211 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 CTXN3Q4LDR2 81 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 ARHGAP29Q52LW3 1261 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms