RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FGFR1P11362 822 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 SKILP12757 684 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 MYL6P60660 151 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 MFSD4BQ5TF39 518 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 EGFLAMQ63HQ2 1017 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 VPS37AQ8NEZ2 397 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 AGAP3Q96P47 875 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 GANQ9H2C0 597 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 INPP5FQ9Y2H2 1132 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 ENPP3O14638 875 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 PHACTR2O75167 634 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 POMCP01189 267 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 ITGB3P05106 788 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
USP39-210ENST00000459775 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 ARID5AQ03989 594 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 RAPGEF1Q13905 1077 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 TMEM132DQ14C87 1099 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 C16orf87Q6PH81 154 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
USP39-210ENST00000459775 NOP9Q86U38 636 aaKnown RBP11.09□□□□□ -0.63
USP39-210ENST00000459775 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 ECHDC2Q86YB7 292 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 WDR49Q8IV35 697 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 CHST12Q9NRB3 414 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 CHCHD3Q9NX63 227 aaKnown RBP11.09□□□□□ -0.63
USP39-210ENST00000459775 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
USP39-210ENST00000459775 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.08□□□□□ -0.64
USP39-210ENST00000459775 ARL5CA6NH57 179 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 C9IYK1 514 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 ITGA4P13612 1032 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 UCHL3P15374 230 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 KRT9P35527 623 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 SCNN1GP51170 649 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
USP39-210ENST00000459775 NCOA4Q13772 614 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 DUOXA2Q1HG44 320 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 BAP1Q92560 729 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
USP39-210ENST00000459775 ACP6Q9NPH0 428 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 RGS18Q9NS28 235 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 ITIH6Q6UXX5 1313 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 F8W810 466 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 HOXA2O43364 376 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 B4GALT3O60512 393 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 MFAP3LO75121 409 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 UPP2O95045 317 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 IL18RAPO95256 599 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 TIMP1P01033 207 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 RAG1P15918 1043 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 POLR2BP30876 1174 aaKnown RBP11.08□□□□□ -0.64
USP39-210ENST00000459775 TRPC1P48995 793 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 CDR1P51861 262 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
USP39-210ENST00000459775 PPM1KQ8N3J5 372 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 CCDC51Q96ER9 411 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 SPACA7Q96KW9 195 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 KREMEN1Q96MU8 473 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 DPP3Q9NY33 737 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 POLIQ9UNA4 740 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 SQORQ9Y6N5 450 aa11.08□□□□□ -0.64
USP39-210ENST00000459775 SZT2Q5T011 3432 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
USP39-210ENST00000459775 PLEKP08567 350 aaPredicted RBP11.07□□□□□ -0.64
USP39-210ENST00000459775 FOSL2P15408 326 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 GTF2H1P32780 548 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 EPHB4P54760 987 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 TBX4P57082 545 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 SCARA5Q6ZMJ2 495 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 CACNA2D4Q7Z3S7 1137 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 MRPL10Q7Z7H8 261 aaKnown RBP11.07□□□□□ -0.64
USP39-210ENST00000459775 LRRC8AQ8IWT6 810 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 KLHL23Q8NBE8 558 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 HELQQ8TDG4 1101 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 SEPT8Q92599 483 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 CHP1Q99653 195 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
USP39-210ENST00000459775 ASB7Q9H672 318 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms