RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 OR6B3Q8NGW1 331 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 SECISBP2LQ93073 1101 aaKnown RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 SNX27Q96L92 541 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 C16orf45Q96MC5 204 aaPredicted RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 AGPAT1Q99943 283 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 LBHD1Q9BQE6 289 aaPredicted RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 PI4K2AQ9BTU6 479 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRAIPQ9BWF2 469 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 COLEC11Q9BWP8 271 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 NT5C1AQ9BXI3 368 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF518BQ9C0D4 1074 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 GANQ9H2C0 597 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 TSPYL2Q9H2G4 693 aaPredicted RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMX1Q9H3N1 280 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 NXF3Q9H4D5 531 aaKnown RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 ELAC1Q9H777 363 aaKnown RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 MRPL47Q9HD33 250 aaKnown RBP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 ERVK-5Q9HDB9 667 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 RGS18Q9NS28 235 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMEM161AQ9NX61 479 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 CNTN3Q9P232 1028 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 INTUQ9ULD6 942 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 STRIP2Q9ULQ0 834 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 INPP5FQ9Y2H2 1132 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 PCDHA13Q9Y5I0 950 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 SNX9Q9Y5X1 595 aa6.24□□□□□ -1.41
RNU1-88P-201ENST00000459274 ABHD14A-ACY1A0A1B0GW23 586 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CTAGE9A4FU28 777 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ARL5CA6NH57 179 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TTLL13PA6NNM8 815 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 A8MXQ7 604 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYP26A1O43174 497 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TADA2AO75478 443 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CST3P01034 146 aaPredicted RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 NFICP08651 508 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 VDRP11473 427 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ODC1P11926 461 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GZMAP12544 262 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 KCNE1P15382 129 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 PCSK1P29120 753 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GNL1P36915 607 aaPredicted RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 MLH1P40692 756 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 PRKCIP41743 596 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 VAV2P52735 878 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GNG11P61952 73 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TUBB4BP68371 445 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CDR2Q01850 454 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TLE2Q04725 743 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ELAVL2Q12926 359 aaKnown RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TUSC3Q13454 348 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ARID5BQ14865 1188 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 NAB2Q15742 525 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRIM60Q495X7 471 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 SGO2Q562F6 1265 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 NOMO2Q5JPE7 1267 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZBTB41Q5SVQ8 909 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CNKSR3Q6P9H4 555 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 C15orf39Q6ZRI6 1047 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 DEFB128Q7Z7B8 93 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 MRPL10Q7Z7H8 261 aaKnown RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 UNC93AQ86WB7 457 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ECHDC2Q86YB7 292 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CEP120Q8N960 986 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 RBBP8NLQ8NC74 664 aaPredicted RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 OR5B17Q8NGF7 314 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 IPO4Q8TEX9 1081 aaKnown RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMEM40Q8WWA1 233 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 SHC3Q92529 594 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 BAP1Q92560 729 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF516Q92618 1163 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GOLGA1Q92805 767 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TATDN2Q93075 761 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 PAWRQ96IZ0 340 aaKnown RBP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GAD1Q99259 594 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CHP1Q99653 195 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZBED2Q9BTP6 218 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 MED10Q9BTT4 135 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 SELENOOQ9BVL4 669 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPP1R12CQ9BZL4 782 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 TTYH3Q9C0H2 523 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CRISPLD2Q9H0B8 497 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 AAASQ9NRG9 546 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 CISHQ9NSE2 258 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 STK39Q9UEW8 545 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 HES2Q9Y543 173 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 ADGRG1Q9Y653 693 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 GRIN2DO15399 1336 aa6.23□□□□□ -1.41
RNU1-88P-201ENST00000459274 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 MACROD2A1Z1Q3 448 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMCO5BA8MYB1 307 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYB561D2O14569 222 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ABLIM1O14639 778 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 LPXNO60711 386 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 B3GAT3O94766 335 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 NOL4O94818 638 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms