RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TISP43B9A030 160 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 TRAFD1O14545 582 aaPredicted RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 ABLIM1O14639 778 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 PEX11AO75192 247 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 COL2A1P02458 1487 aaPredicted RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 ADRB2P07550 413 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 UNGP13051 313 aaPredicted RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 PLS3P13797 630 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CALB2P22676 271 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ADSSP30520 456 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ABL2P42684 1182 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CRKP46108 304 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CCNHP51946 323 aaPredicted RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 CCNG2Q16589 344 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CCDC142Q17RM4 750 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ABCB5Q2M3G0 1257 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 MROH7Q68CQ1 1323 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 NSMFQ6X4W1 530 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 TRABD2AQ86V40 505 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 PPM1KQ8N3J5 372 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ENDOVQ8N8Q3 282 aaKnown RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 CCDC89Q8N998 374 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ATG4AQ8WYN0 398 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 NAF1Q96HR8 494 aaKnown RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 RIT2Q99578 217 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ZNF577Q9BSK1 485 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 TEKT3Q9BXF9 490 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 IQCGQ9H095 443 aaKnown RBP9.02□□□□□ -0.97
VPS50-208ENST00000458707 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 ACP6Q9NPH0 428 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CYP39A1Q9NYL5 469 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 CHKBQ9Y259 395 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 BCS1LQ9Y276 419 aa9.02□□□□□ -0.97
VPS50-208ENST00000458707 RASA4BC9J798 803 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 PPEF1O14829 653 aaPredicted RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 RASA4O43374 803 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 DCTN3O75935 186 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 MYBL1P10243 752 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 GYS1P13807 737 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 RRM1P23921 792 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 KLRC2P26717 231 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 GCAP28676 217 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 MAPK4P31152 587 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 ADCY8P40145 1251 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 IKQ13123 557 aaPredicted RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 RASA2Q15283 850 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 KRT39Q6A163 491 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 FAM196AQ6ZSG2 479 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 ANKS1BQ7Z6G8 1248 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 NME8Q8N427 588 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 ZCCHC9Q8N567 271 aaKnown RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 ZSWIM2Q8NEG5 633 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 STK32AQ8WU08 396 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 KIFAP3Q92845 792 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 SLC7A6OSQ96CW6 309 aaPredicted RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 TLE6Q9H808 572 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 TMEM8AQ9HCN3 771 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 SENP1Q9P0U3 644 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 TBK1Q9UHD2 729 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 ANAPC7Q9UJX3 599 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 PHTF1Q9UMS5 762 aa9.01□□□□□ -0.97
VPS50-208ENST00000458707 R3HDM2Q9Y2K5 976 aaKnown RBP9.01□□□□□ -0.97
VPS50-208ENST00000458707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS50-208ENST00000458707 UMODL1Q5DID0 1318 aa9□□□□□ -0.97
VPS50-208ENST00000458707 PSTPIP1O43586 416 aa9□□□□□ -0.97
VPS50-208ENST00000458707 EDF1O60869 148 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 SKAP2O75563 359 aaPredicted RBP9□□□□□ -0.97
VPS50-208ENST00000458707 CFBP00751 764 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TPBGLP0DKB5 382 aa9□□□□□ -0.97
VPS50-208ENST00000458707 T-ENOLP0DO92 83 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ARP10275 920 aa9□□□□□ -0.97
VPS50-208ENST00000458707 MAGEA4P43358 317 aa9□□□□□ -0.97
VPS50-208ENST00000458707 STAT2P52630 851 aa9□□□□□ -0.97
VPS50-208ENST00000458707 NCKAP1LP55160 1127 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ENPEPQ07075 957 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TAF11Q15544 211 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TRIP13Q15645 432 aaPredicted RBP9□□□□□ -0.97
VPS50-208ENST00000458707 VPS72Q15906 364 aa9□□□□□ -0.97
VPS50-208ENST00000458707 PDK4Q16654 411 aa9□□□□□ -0.97
VPS50-208ENST00000458707 WASHC2DQ5SRD0 308 aa9□□□□□ -0.97
VPS50-208ENST00000458707 IZUMO3Q5VZ72 239 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SEPT14Q6ZU15 432 aa9□□□□□ -0.97
VPS50-208ENST00000458707 HAUS6Q7Z4H7 955 aa9□□□□□ -0.97
VPS50-208ENST00000458707 APLFQ8IW19 511 aaPredicted RBP9□□□□□ -0.97
VPS50-208ENST00000458707 MCOLN2Q8IZK6 566 aa9□□□□□ -0.97
VPS50-208ENST00000458707 FAM13CQ8NE31 585 aa9□□□□□ -0.97
VPS50-208ENST00000458707 C10orf82Q8WW14 230 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ERP27Q96DN0 273 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TRIM11Q96F44 468 aa9□□□□□ -0.97
VPS50-208ENST00000458707 CFAP57Q96MR6 1250 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TTC25Q96NG3 672 aa9□□□□□ -0.97
VPS50-208ENST00000458707 LRRC37BQ96QE4 947 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms