RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 ZNF461Q8TAF7 563 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 SUSD3Q96L08 255 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 HAPLN2Q9GZV7 340 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 PLEKHA5Q9HAU0 1116 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 CCDC39Q9UFE4 941 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 FBXL5Q9UKA1 691 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 OGTO15294 1046 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 ABCD1P33897 745 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 ZNF131P52739 623 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 NPAS3Q8IXF0 933 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 ELMOD1Q8N336 334 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 DDX12PQ92771 950 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 SECISBP2LQ93073 1101 aaKnown RBP17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 CORO1BQ9BR76 489 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 PCDHGA2Q9Y5H1 932 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 CFAP47Q6ZTR5 3102 aa17.12■□□□□ 0.33
CHCHD3-204ENST00000457942 NOTCH4Q99466 2003 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 TTC26A0AVF1 554 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 RHOP08100 348 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 ATF2P15336 505 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 NMT1P30419 496 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 GUCY2FP51841 1108 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 LMNB2Q03252 620 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 ZNF528Q3MIS6 628 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 TPGS2Q68CL5 300 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 DSTYKQ6XUX3 929 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 USP37Q86T82 979 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 TMEM130Q8N3G9 435 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 MCRS1Q96EZ8 462 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 DDX23Q9BUQ8 820 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 INSL5Q9Y5Q6 135 aa17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 MAP1BP46821 2468 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-204ENST00000457942 ARHGEF37A1IGU5 675 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 ABLIM3O94929 683 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 PIGRP01833 764 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 PTPN2P17706 415 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 CYP3A5P20815 502 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 SYT1P21579 422 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 DDIT3P35638 169 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 PRKCQQ04759 706 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 ADCY1Q08828 1119 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 ENOX2Q16206 610 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 FAM173BQ6P4H8 233 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 MAP4K3Q8IVH8 894 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 EPC1Q9H2F5 836 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 STK17AQ9UEE5 414 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 USP24Q9UPU5 2620 aa17.1■□□□□ 0.33
CHCHD3-204ENST00000457942 SEC24AO95486 1093 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 CEBPBP17676 345 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 LRPAP1P30533 357 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 SPEM2Q0P670 501 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 RESTQ13127 1097 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 SLC5A9Q2M3M2 681 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 JADE1Q6IE81 842 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 PDZD4Q76G19 769 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 TCEAL8Q8IYN2 117 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 AFF4Q9UHB7 1163 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 GMEB2Q9UKD1 530 aa17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 NDRG2Q9UN36 371 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-204ENST00000457942 TCHHQ07283 1943 aa17.08■□□□□ 0.33
CHCHD3-204ENST00000457942 ANK1P16157 1881 aa17.08■□□□□ 0.33
CHCHD3-204ENST00000457942 A0A0B4J269 797 aa17.08■□□□□ 0.32
CHCHD3-204ENST00000457942 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
CHCHD3-204ENST00000457942 SDHBP21912 280 aa17.08■□□□□ 0.32
CHCHD3-204ENST00000457942 GTF2BQ00403 316 aa17.08■□□□□ 0.32
CHCHD3-204ENST00000457942 TWF1Q12792 350 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms