RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SOX4Q06945 474 aaPredicted RBP15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 CTXN3Q4LDR2 81 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 XKR4Q5GH76 650 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 TPGS2Q68CL5 300 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 VITQ6UXI7 678 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 ALKAL1Q6UXT8 129 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 MAP4K3Q8IVH8 894 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 NETO1Q8TDF5 533 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 DEPDC1BQ8WUY9 529 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 POLD4Q9HCU8 107 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 FBXL5Q9UKA1 691 aa15.72■□□□□ 0.11
UPF3AP2-201ENST00000457924 EPG5Q9HCE0 2579 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 ZNF263O14978 683 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 LRP3O75074 770 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 RETP07949 1114 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 MUTP22033 750 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 CCR2P41597 374 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 CXCL12P48061 93 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 ZNF568Q3ZCX4 644 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 CEP120Q8N960 986 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 LEMD2Q8NC56 503 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 GTF3C6Q969F1 213 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 ZSWIM3Q96MP5 696 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 ASAH2Q9NR71 780 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 MAFFQ9ULX9 164 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 CITO14578 2027 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 RALGAPA1Q6GYQ0 2036 aa15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
UPF3AP2-201ENST00000457924 ACACBO00763 2458 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 NRG2O14511 850 aaPredicted RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 OR52Z1P0C646 297 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 MYL4P12829 197 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 VIPR2P41587 438 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 TWF1Q12792 350 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 SIM2Q14190 667 aaPredicted RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 MRPL58Q14197 206 aaKnown RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 SAFBQ15424 915 aaKnown RBP eCLIP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 ME3Q16798 604 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 ZNF280DQ6N043 979 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 MFSD6LQ8IWD5 586 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 NSUN7Q8NE18 718 aaKnown RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 ZSCAN18Q8TBC5 510 aaPredicted RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 E2F7Q96AV8 911 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 ACAP3Q96P50 834 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 CDT1Q9H211 546 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 BHMT2Q9H2M3 363 aa15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
UPF3AP2-201ENST00000457924 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 SLC30A4O14863 429 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 CHRNB1P11230 501 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 KCNE1P15382 129 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 CCNE1P24864 410 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 MCM4P33991 863 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 MLLT6P55198 1093 aaPredicted RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 SATB1Q01826 763 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 LRRC32Q14392 662 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 ZNF174Q15697 407 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 PPM1JQ5JR12 505 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 C1orf228Q6PIY5 440 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 YAF2Q8IY57 180 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 SPEM1Q8N4L4 309 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 APPL2Q8NEU8 664 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 CSGALNACT1Q8TDX6 532 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 MSANTD3Q96H12 275 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 ZMAT2Q96NC0 199 aaKnown RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 TCHPQ9BT92 498 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 MRPL4Q9BYD3 311 aaKnown RBP15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 GPR88Q9GZN0 384 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 SLITRK6Q9H5Y7 841 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 TMEM134Q9H6X4 195 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 TRPV4Q9HBA0 871 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 PTPRHQ9HD43 1115 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 SEMA4GQ9NTN9 838 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 CEP72Q9P209 647 aa15.69■□□□□ 0.1
UPF3AP2-201ENST00000457924 JAK2O60674 1132 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 MOSPD3O75425 235 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 LARGE1O95461 756 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 MCF2P10911 925 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 CPB1P15086 417 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 GJA1P17302 382 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 CNR2P34972 360 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 EPHA5P54756 1037 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 PEX3P56589 373 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 ANAPC15P60006 121 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 DMP1Q13316 513 aaPredicted RBP15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 TEAD2Q15562 447 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 CSRP2Q16527 193 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 ST3GAL2Q16842 350 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 PRR23CQ6ZRP0 262 aa15.68■□□□□ 0.1
UPF3AP2-201ENST00000457924 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms