RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 MAN2A1Q16706 1144 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 SV2CQ496J9 727 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CBWD6Q4V339 395 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 DCAF17Q5H9S7 520 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CBWD3Q5JTY5 395 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CBWD5Q5RIA9 395 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TAS1R1Q7RTX1 841 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 LIMS2Q7Z4I7 341 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TAS1R2Q8TE23 839 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TAF4BQ92750 862 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CBX8Q9HC52 389 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 NUB1Q9Y5A7 615 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 PLXNA3P51805 1871 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CDH23Q9H251 3354 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 N4BP1O75113 896 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 HLA-DRAP01903 254 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 AFPP02771 609 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 CYP11A1P05108 521 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 TYMPP19971 482 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MYL6P60660 151 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 DSG1Q02413 1049 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MYO1EQ12965 1108 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 BIRC3Q13489 604 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 TRPC3Q13507 836 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 NCOA4Q13772 614 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 APTXQ7Z2E3 356 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 FBXL13Q8NEE6 735 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MRPL38Q96DV4 380 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 SENP8Q96LD8 212 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 TUBGCP2Q9BSJ2 902 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 LIMA1Q9UHB6 759 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
TRAPPC12-212ENST00000457845 PTPRDP23468 1912 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 I3L4J1 428 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 PHACTR2O75167 634 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 LRRN2O75325 713 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 FAM163BP0C2L3 166 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 MTIF2P46199 727 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 KRT31Q15323 416 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 HSP90AA4PQ58FG1 418 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 LMO3Q8TAP4 145 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 PIK3R5Q8WYR1 880 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 SEMA4DQ92854 862 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 TTPALQ9BTX7 342 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 MMRN2Q9H8L6 949 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 RAB20Q9NX57 234 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 R3HCC1Q9Y3T6 440 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-212ENST00000457845 ARHGEF37A1IGU5 675 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 BECN2A8MW95 431 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 CYB561D2O14569 222 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 OAZ2O95190 189 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 TKTP29401 623 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 IRS1P35568 1242 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 GLUD2P49448 558 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 PTPROQ16827 1216 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 VWA3BQ502W6 1294 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 Q7L0L9 218 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 LUZP1Q86V48 1076 aa12.64□□□□□ -0.39
TRAPPC12-212ENST00000457845 CREBRFQ8IUR6 639 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms