RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 AXLP30530 894 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 CYP2C18P33260 490 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 STAT1P42224 750 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 ZNF132P52740 706 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 CCL23P55773 120 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
RIF1-208ENST00000457745 LLGL2Q6P1M3 1020 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 LRRC8DQ7L1W4 858 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 MRPL10Q7Z7H8 261 aaKnown RBP9.39□□□□□ -0.91
RIF1-208ENST00000457745 CPNE8Q86YQ8 564 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
RIF1-208ENST00000457745 PPP1R10Q96QC0 940 aaKnown RBP9.39□□□□□ -0.91
RIF1-208ENST00000457745 SPAG5Q96R06 1193 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 WDR24Q96S15 920 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 GAD1Q99259 594 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 ADAM2Q99965 735 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 ADPGKQ9BRR6 497 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 CCDC94Q9BW85 323 aaPredicted RBP9.39□□□□□ -0.91
RIF1-208ENST00000457745 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 ELOVL4Q9GZR5 314 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 AGAP1Q9UPQ3 857 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 NOD1Q9Y239 953 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 MICAL3Q7RTP6 2002 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 DNAH12Q6ZR08 3092 aa9.39□□□□□ -0.91
RIF1-208ENST00000457745 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 EIF3CLB5ME19 914 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 C9IYK1 514 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 M0QZ92 97 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 PHACTR2O75167 634 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 TNNC2P02585 160 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 MMEP08473 750 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 KRT19P08727 400 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 TPM1P09493 284 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 FGFR1P11362 822 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 SELPP16109 830 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 CD58P19256 250 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 MSNP26038 577 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 USP8P40818 1118 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 GJA8P48165 433 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 SCNN1GP51170 649 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 CDR1P51861 262 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 CDC42EP1Q00587 391 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 FMO1Q01740 532 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 KLHL30Q0D2K2 578 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 PAK2Q13177 524 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 TDRD12Q587J7 1177 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 CLLU1OSQ5K130 101 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 RSPH3Q86UC2 560 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 OSTM1Q86WC4 334 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 ECHDC2Q86YB7 292 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 ARHGEF26Q96DR7 871 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 PAWRQ96IZ0 340 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 EIF3CQ99613 913 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 MCOLN1Q9GZU1 580 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 ASB7Q9H672 318 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 LZTFL1Q9NQ48 299 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 CHORDC1Q9UHD1 332 aaPredicted RBP9.38□□□□□ -0.91
RIF1-208ENST00000457745 TBX21Q9UL17 535 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 CNTN6Q9UQ52 1028 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
RIF1-208ENST00000457745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 TMCO5BA8MYB1 307 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ZC3H11AO75152 810 aaKnown RBP eCLIP9.37□□□□□ -0.91
RIF1-208ENST00000457745 KCNE1P15382 129 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 CYP11B1P15538 503 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 FERP16591 822 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 GCNT1Q02742 428 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ZNF699Q32M78 642 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 UBE2Q1Q7Z7E8 422 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 RPUSD2Q8IZ73 545 aaKnown RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 RBBP8NLQ8NC74 664 aaPredicted RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 RNF169Q8NCN4 708 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ZNF397Q8NF99 534 aaPredicted RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 DBF4BQ8NFT6 615 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 TRIM43Q96BQ3 446 aaPredicted RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 IQCDQ96DY2 449 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ANKRD36BP1Q96IX9 119 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 AGPAT1Q99943 283 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 MRPL45Q9BRJ2 306 aaKnown RBP9.37□□□□□ -0.91
RIF1-208ENST00000457745 BCO2Q9BYV7 579 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 C1orf112Q9NSG2 853 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms